RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
TRA2B-206ENST00000456380 PCDHB9Q9Y5E1 797 aa13.02□□□□□ -0.33
TRA2B-206ENST00000456380 A0A1B0GTW7 788 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 NPC1O15118 1278 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 CBFA2T3O75081 653 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 F13A1P00488 732 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 HMBSP08397 361 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 ZSCAN22P10073 491 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-206ENST00000456380 RALAP11233 206 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 CORO1AP31146 461 aaKnown RBP13.01□□□□□ -0.33
TRA2B-206ENST00000456380 CHKAP35790 457 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 GCLMP48507 274 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 TPMTP51580 245 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 COG7P83436 770 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 SCAPQ12770 1279 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 TMPRSS6Q8IU80 811 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
TRA2B-206ENST00000456380 RBBP8NLQ8NC74 664 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-206ENST00000456380 IL21RQ9HBE5 538 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 ELOVL2Q9NXB9 296 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 AGO1Q9UL18 857 aaKnown RBP13.01□□□□□ -0.33
TRA2B-206ENST00000456380 TRAF3IP3Q9Y228 551 aa13.01□□□□□ -0.33
TRA2B-206ENST00000456380 APC2O95996 2303 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 ACACAQ13085 2346 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 METTL12A8MUP2 240 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 MEI4A8MW99 385 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 MAPK13O15264 365 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 COPAP53621 1224 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 BNC1Q01954 994 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 EFEMP1Q12805 493 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 ZNF234Q14588 700 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 ZNF394Q53GI3 561 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 TMEM215Q68D42 235 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 SORCS1Q8WY21 1168 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 CDK5RAP1Q96SZ6 601 aaKnown RBP13□□□□□ -0.33
TRA2B-206ENST00000456380 IMPG2Q9BZV3 1241 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 DCLK3Q9C098 648 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 NIF3L1Q9GZT8 377 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 MIR1-1HGQ9H1L0 117 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 RCOR1Q9UKL0 485 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
TRA2B-206ENST00000456380 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 SYNCRIPO60506 623 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 IGLV3-19P01714 112 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 PRKCHP24723 683 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 OXTRP30559 389 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 GLRX5Q86SX6 157 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 DENND1CQ8IV53 801 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 C1orf216Q8TAB5 229 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 PRCCQ92733 491 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 HEXIM2Q96MH2 286 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 GAREM1Q9H706 876 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 A0A1B0GVL5 298 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 BCAT2O15382 392 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 NR2F2P24468 414 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 PKP1Q13835 747 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 INTS8Q75QN2 995 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CACUL1Q86Y37 369 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 SETD7Q8WTS6 366 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 NUP58Q9BVL2 599 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CIPCQ9C0C6 399 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 MARCH2Q9P0N8 246 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
TRA2B-206ENST00000456380 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
TRA2B-206ENST00000456380 CABIN1Q9Y6J0 2220 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 SLC12A8A0AV02 714 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 CYBBP04839 570 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 EPHX1P07099 455 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 ZNF883P0CG24 379 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 ACADMP11310 421 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 PFKFB1P16118 471 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRA2B-206ENST00000456380 ACAP1Q15027 740 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 EIF4HQ15056 248 aaKnown RBP12.98□□□□□ -0.33
TRA2B-206ENST00000456380 NFIL3Q16649 462 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 HLA-BQ31612 363 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 RAB41Q5JT25 222 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 C19orf48Q6RUI8 117 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 DBX2Q6ZNG2 339 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 FAM217AQ8IXS0 508 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
TRA2B-206ENST00000456380 SLC4A11Q8NBS3 891 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms