RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 GLRX5Q86SX6 157 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 NAXDQ8IW45 347 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 DEFB119Q8N690 84 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 ENGASEQ8NFI3 743 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 PLEKHO2Q8TD55 490 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 ADAMTS14Q8WXS8 1223 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 DNASE2BQ8WZ79 361 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 PRCCQ92733 491 aaPredicted RBP8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 ACOX2Q99424 681 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 CDC6Q99741 560 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 NUP58Q9BVL2 599 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 SLC2A11Q9BYW1 496 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 SDCBP2Q9H190 292 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 FBRSQ9HAH7 460 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 ITM2CQ9NQX7 267 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 FAM49BQ9NUQ9 324 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 USP36Q9P275 1121 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 FBXO10Q9UK96 956 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 STON1Q9Y6Q2 735 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 ACACAQ13085 2346 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 BAHCC1Q9P281 2608 aa8.43□□□□□ -1.06
NIF3L1-209ENST00000454952 A0A1W2PQH9 124 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 HHLA1C9JL84 531 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 TRIM24O15164 1050 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 BCAT2O15382 392 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 SH3BP5O60239 455 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 GJB3O75712 270 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 STC2O76061 302 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 BEST1O76090 585 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 IGLV3-19P01714 112 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 HLA-DRAP01903 254 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 FTH1P19P0C7X4 201 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 NCAM1P13591 858 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 RPL13P26373 211 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 GTF2H1P32780 548 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 MATKP42679 507 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 VAMP7P51809 220 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 KIF11P52732 1056 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 MFAP3P55082 362 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 ARID5AQ03989 594 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 PDE4CQ08493 712 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 GRIK2Q13002 908 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 CUL4BQ13620 913 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 ENPP2Q13822 863 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 SUZ12Q15022 739 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 FUT11Q495W5 492 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 CEP135Q66GS9 1140 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 TOGARAM2Q6ZUX3 1019 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 RSRC2Q7L4I2 434 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 PROSER1Q86XN7 944 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 TMPRSS6Q8IU80 811 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 CHCHD4Q8N4Q1 142 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 C12orf29Q8N999 325 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 WBP2Q969T9 261 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 SIPA1Q96FS4 1042 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 TOE1Q96GM8 510 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 DUSP16Q9BY84 665 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 UBXN6Q9BZV1 441 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 KCTD10Q9H3F6 313 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 FSCN3Q9NQT6 498 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 WSB2Q9NYS7 404 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 KIAA1522Q9P206 1035 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 THAP10Q9P2Z0 257 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 PCDHGB2Q9Y5G2 931 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 RAD54BQ9Y620 910 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 CABIN1Q9Y6J0 2220 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 FRYQ5TBA9 3013 aa8.42□□□□□ -1.06
NIF3L1-209ENST00000454952 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ADAMTS20P59510 1910 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 METTL12A8MUP2 240 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 FLRT2O43155 660 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 STX10O60499 249 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 CILPO75339 1184 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ZSCAN22P10073 491 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 CORO1AP31146 461 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 PGFP49763 221 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 TPMTP51580 245 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 AFF3P51826 1226 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 DLG4P78352 724 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 RING1Q06587 406 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 STK4Q13043 487 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ORC1Q13415 861 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 TEAD4Q15561 434 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 NFIL3Q16649 462 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 INAVAQ3KP66 663 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 KMT5BQ4FZB7 885 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 CCNI2Q6ZMN8 369 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 GPRIN1Q7Z2K8 1008 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 CPXM2Q8N436 756 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 ZNF557Q8N988 423 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 KIAA0895Q8NCT3 520 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 WFIKKN2Q8TEU8 576 aa8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 SETD7Q8WTS6 366 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-209ENST00000454952 BHMTQ93088 406 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms