RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 GBP1P32455 592 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 IRS1P35568 1242 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FNTAP49354 379 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 PSEN1P49768 467 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 AIF1P55008 147 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ERVK-21P61565 698 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 VSNL1P62760 191 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CREMQ03060 361 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 UBE3AQ05086 875 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TWF1Q12792 350 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SNX1Q13596 522 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DHX34Q14147 1143 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 KRT81Q14533 505 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TRADDQ15628 312 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 OASLQ15646 514 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ZFYVE27Q5T4F4 411 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM72AQ5TYM5 149 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SLC9A4Q6AI14 798 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM72DQ6L9T8 149 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DRICH1Q6PGQ1 229 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CCDC137Q6PK04 289 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CCNI2Q6ZMN8 369 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SPATA31D4Q6ZUB0 917 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TMC7Q7Z402 723 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DNAJB7Q7Z6W7 309 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TMEM150AQ86TG1 271 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM72BQ86X60 149 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 RFX6Q8HWS3 928 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 MAP7D3Q8IWC1 876 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 PLD5Q8N7P1 536 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CCDC26Q8TAB7 109 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SLC35B2Q8TB61 432 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CASKIN2Q8WXE0 1202 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 OVCA2Q8WZ82 227 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SEC14L1Q92503 715 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 RUBCNQ92622 972 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 NKD2Q969F2 451 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TRMT2BQ96GJ1 504 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM118BQ9BPY3 351 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TCF25Q9BQ70 676 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 HINFPQ9BQA5 517 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF670Q9BS34 389 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 CALN1Q9BXU9 219 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 LRRC3Q9BY71 257 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 PLEKHA4Q9H4M7 779 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DHX35Q9H5Z1 703 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 WDCPQ9H6R7 721 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 FAM204AQ9H8W3 233 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 GDF3Q9NR23 364 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 TLR8Q9NR97 1041 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 HOMER3Q9NSC5 361 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DDIT4Q9NX09 232 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 COX16Q9P0S2 106 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 STIM2Q9P246 746 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SAE1Q9UBE0 346 aaPredicted RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DNPEPQ9ULA0 475 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 DRG1Q9Y295 367 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 YBX2Q9Y2T7 364 aaKnown RBP6.23□□□□□ -1.41
SDC4P-201ENST00000453285 NEU2Q9Y3R4 380 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 PCDHA11Q9Y5I1 949 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 INSL5Q9Y5Q6 135 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 SNX10Q9Y5X0 201 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 NR2E3Q9Y5X4 410 aa6.23□□□□□ -1.41
SDC4P-201ENST00000453285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ZNF840PA6NDX5 716 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 H3BNC9 293 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 APOC4-APOC2K7ER74 178 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DCLK1O15075 740 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MSI1O43347 362 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 HEXIM1O94992 359 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 C1RP00736 705 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 IGLV3-27P01718 113 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 APOC2P02655 101 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 F11P03951 625 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TUBBP07437 444 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 CA3P07451 260 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 MYBL2P10244 700 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PECAM1P16284 738 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 GOT1P17174 413 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 IVDP26440 423 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TNFRSF8P28908 595 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ELF1P32519 619 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PBX2P40425 430 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 ALDH1A3P47895 512 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 HCAR3P49019 387 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 CARSP49589 748 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 CLCN4P51793 760 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DRG2P55039 364 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DYNLT1P63172 113 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DR1Q01658 176 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 OTUD4Q01804 1114 aaKnown RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 GUCY2DQ02846 1103 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 SLC10A2Q12908 348 aaPredicted RBP6.22□□□□□ -1.41
SDC4P-201ENST00000453285 DPYSQ14117 519 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TFDP2Q14188 446 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 PPP2R5DQ14738 602 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 BRD3Q15059 726 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 NOMO1Q15155 1222 aa6.22□□□□□ -1.41
SDC4P-201ENST00000453285 TRIP4Q15650 581 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms