RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 DTX3Q8N9I9 347 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DENND1AQ8TEH3 1009 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 SCFD1Q8WVM8 642 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RFFLQ8WZ73 363 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIFAP3Q92845 792 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 CD101Q93033 1021 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 CALML4Q96GE6 196 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 RUNDC3BQ96NL0 473 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 NAP1L3Q99457 506 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 SELENOSQ9BQE4 189 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 LZTS2Q9BRK4 669 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM167BQ9BTA0 163 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 IER2Q9BTL4 223 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM7Q9C029 511 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM192AQ9GZU8 254 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DLL4Q9NR61 685 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 GPR27Q9NS67 375 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TXLNGQ9NUQ3 528 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PPP1R1BQ9UD71 204 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 LNPEPQ9UIQ6 1025 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 AJAP1Q9UKB5 411 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 AMFRQ9UKV5 643 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZMYND8Q9ULU4 1186 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHKBQ9Y259 395 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRCH1Q9Y2L9 728 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 THRAP3Q9Y2W1 955 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 PFASO15067 1338 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 FRMPD4Q14CM0 1322 aa4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 DDX60LQ5H9U9 1706 aaKnown RBP4.38□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM120BA0PK00 339 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MIF4GDA9UHW6 222 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ANKRD63C9JTQ0 380 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 hCG_1984214I3L0E3 225 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNAP23O00161 211 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 AGRPO00253 132 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRAF5O00463 557 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MPHOSPH10O00566 681 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC16A3O15427 465 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FOXS1O43638 330 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 HNRNPCL1O60812 293 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 CNOT4O95628 575 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ASMTLO95671 621 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TTLL1O95922 423 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 KNG1P01042 644 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM163BP0C2L3 166 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ACTN1P12814 892 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 CREB1P16220 341 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAHP16930 419 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC9A1P19634 815 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 IVDP26440 423 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TECP42680 631 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTDSS1P48651 473 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SELENOPP49908 381 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNA2P51530 1060 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 POLGP54098 1239 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAD23BP54727 409 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 GALCP54803 685 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 PLTPP55058 493 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MXRA7P84157 204 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAP4K2Q12851 820 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 CUL3Q13618 768 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 LAMB3Q13751 1172 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 RASA2Q15283 850 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC41Q15345 812 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 GSTA3Q16772 222 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM63BQ5T3F8 832 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DAB2IPQ5VWQ8 1189 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM91A1Q658Y4 838 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPTY2D1Q68D10 685 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP4F22Q6NT55 531 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 C11orf63Q6NUN7 778 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 TCTN3Q6NUS6 607 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 KCNT2Q6UVM3 1135 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 KIF6Q6ZMV9 814 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 C4orf50Q6ZRC1 276 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 EEPD1Q7L9B9 569 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 GPR155Q7Z3F1 870 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARHGAP22Q7Z5H3 698 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DAAM2Q86T65 1068 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAJC10Q8IXB1 793 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 NELFCDQ8IXH7 590 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF713Q8N859 430 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SUPT20HQ8NEM7 779 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 B4GALNT2Q8NHY0 566 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC35G2Q8TBE7 412 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZCRB1Q8TBF4 217 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM81AQ8TBF8 368 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF398Q8TD17 642 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MORC4Q8TE76 937 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 FBXO41Q8TF61 875 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 C10orf82Q8WW14 230 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAJC9Q8WXX5 260 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 MAML1Q92585 1016 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 GLG1Q92896 1179 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 PTPRN2Q92932 1015 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 ARHGEF2Q92974 986 aaKnown RBP4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 AJUBAQ96IF1 538 aa4.37□□□□□ -1.71
HMGB3P22-202ENST00000451823 RBM41Q96IZ5 413 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms