RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 THAP9Q9H5L6 903 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 PLCB1Q9NQ66 1216 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 SAMSN1Q9NSI8 373 aaKnown RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 CACNA2D2Q9NY47 1150 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 TJP2Q9UDY2 1190 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 CYTH4Q9UIA0 394 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 CLEC4EQ9ULY5 219 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 ZNF510Q9Y2H8 683 aa10.11□□□□□ -0.79
USP54-207ENST00000451492 RIF1Q5UIP0 2472 aaKnown RBP10.11□□□□□ -0.79
USP54-207ENST00000451492 ABCA7Q8IZY2 2146 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 CCDC163A0A0D9SF12 145 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 BECN2A8MW95 431 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 E5RJQ4 531 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 EPN2O95208 641 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 PON1P27169 355 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 NTSR1P30989 418 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 MPLP40238 635 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 GPD2P43304 727 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 DHPSP49366 369 aaPredicted RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 SGSHP51688 502 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 RAPGEF1Q13905 1077 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 GEN1Q17RS7 908 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 USP39Q53GS9 565 aaKnown RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 TCEAL6Q6IPX3 200 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 ENOSF1Q7L5Y1 443 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 DEFB119Q8N690 84 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 C12orf50Q8NA57 414 aaPredicted RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 ZNF606Q8WXB4 792 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 TCEAL3Q969E4 200 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 SPACA7Q96KW9 195 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 LSM14BQ9BX40 385 aaKnown RBP10.1□□□□□ -0.79
USP54-207ENST00000451492 CIPCQ9C0C6 399 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 NDST4Q9H3R1 872 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 TAB2Q9NYJ8 693 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 EBF1Q9UH73 591 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 DNAJC12Q9UKB3 198 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 CKAP5Q14008 2032 aa10.1□□□□□ -0.79
USP54-207ENST00000451492 GVINP1Q7Z2Y8 2422 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 SDK1Q7Z5N4 2213 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 PTPRZ1P23471 2315 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 TP53BP1Q12888 1972 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 GOLGA6L7A0A1B0GV03 622 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 GOLGA6L22H0YM25 854 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 CAPN9O14815 690 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 MAP3K13O43283 966 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 FBXO21O94952 628 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 PENKP01210 267 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 TGM1P22735 817 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 NUMBP49757 651 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 TBX4P57082 545 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 LMNB2Q03252 620 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 ARID5AQ03989 594 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 PDCLQ13371 301 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 TRIP4Q15650 581 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 VWA3BQ502W6 1294 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 MIIPQ5JXC2 388 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 SDE2Q6IQ49 451 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 KIAA1211LQ6NV74 962 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 KIAA1324Q6UXG2 1013 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 C11orf57Q6ZUT1 292 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 DGLUCYQ7Z3D6 616 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 TMEFF1Q8IYR6 380 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 ZNF276Q8N554 614 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 C1orf131Q8NDD1 294 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 DQX1Q8TE96 717 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 SORCS1Q8WY21 1168 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 IRGQQ8WZA9 623 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 PIWIL1Q96J94 861 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 HSFY1Q96LI6 401 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 SIX2Q9NPC8 291 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 CD93Q9NPY3 652 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 STIM2Q9P246 746 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 CNTN6Q9UQ52 1028 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 NFE2L3Q9Y4A8 694 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 FHOD1Q9Y613 1164 aa10.09□□□□□ -0.79
USP54-207ENST00000451492 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
USP54-207ENST00000451492 GPR179Q6PRD1 2367 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 PAPSS1O43252 624 aaPredicted RBP10.08□□□□□ -0.8
USP54-207ENST00000451492 TBL1XO60907 577 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms