RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 C9orf57Q5W0N0 161 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 CASC4Q6P4E1 433 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 SLC27A1Q6PCB7 646 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 C4orf50Q6ZRC1 276 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 SLC26A9Q7LBE3 791 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 ZDHHC17Q8IUH5 632 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 NUDCD3Q8IVD9 361 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 GPRC5AQ8NFJ5 357 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 QKIQ96PU8 341 aaKnown RBP eCLIP22.91■■□□□ 1.263e-11■■■□□ 16.4
TTC3-210ENST00000450533 TMPRSS4Q9NRS4 437 aa22.91■■□□□ 1.26
TTC3-210ENST00000450533 FAM159BA6NKW6 160 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 GSC2O15499 205 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 HNRNPCL1O60812 293 aaKnown RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 ESRRAP11474 423 aaPredicted RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 CCNFP41002 786 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 CCNG1P51959 295 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 HSF5Q4G112 596 aaPredicted RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 ZCCHC23Q6ZST2 131 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 BZW1Q7L1Q6 419 aaKnown RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 ZNF410Q86VK4 478 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 KBTBD7Q8WVZ9 684 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 CENPIQ92674 756 aaPredicted RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 KATNBL1Q9H079 304 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 PLEKHA5Q9HAU0 1116 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 SYNJ2BP-COX16A0A087WUM0 186 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 WDR27A2RRH5 827 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 EIF4E1BA6NMX2 242 aaKnown RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 SPTLC1O15269 473 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 RECQL4O94761 1208 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 SNAI1O95863 264 aaPredicted RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 SMPD1P17405 629 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 SNX16P57768 344 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 MDH1BQ5I0G3 518 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 ARHGAP17Q68EM7 881 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 ANKRD52Q8NB46 1076 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 SLC2A14Q8TDB8 520 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 C20orf27Q9GZN8 174 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 RNF181Q9P0P0 153 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 COX16Q9P0S2 106 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 PCDHA11Q9Y5I1 949 aa22.9■■□□□ 1.26
TTC3-210ENST00000450533 DICER1Q9UPY3 1922 aaKnown RBP22.9■■□□□ 1.26
TTC3-210ENST00000450533 TPSB2P20231 275 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 TPSAB1Q15661 275 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 NBPF20Q3BBV1 942 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 BSPRYQ5W0U4 402 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 UNC93AQ86WB7 457 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 MAB21L3Q8N8X9 362 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 TRIM6Q9C030 488 aaPredicted RBP22.89■■□□□ 1.26
TTC3-210ENST00000450533 ADAMTS10Q9H324 1103 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 GOLGA2P5Q9HBQ8 144 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 TAS2R1Q9NYW7 299 aa22.89■■□□□ 1.26
TTC3-210ENST00000450533 MMP3P08254 477 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 GNL1P36915 607 aaPredicted RBP22.89■■□□□ 1.25
TTC3-210ENST00000450533 BCAT1P54687 386 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 SLC8A3P57103 927 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 TRIM68Q6AZZ1 485 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 APBB1IPQ7Z5R6 666 aaPredicted RBP22.89■■□□□ 1.25
TTC3-210ENST00000450533 LRRC52Q8N7C0 313 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 HTR3CQ8WXA8 447 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 EMID1Q96A84 441 aaPredicted RBP22.89■■□□□ 1.25
TTC3-210ENST00000450533 MIEF2Q96C03 454 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 SIRPGQ9P1W8 387 aa22.89■■□□□ 1.25
TTC3-210ENST00000450533 IL1BP01584 269 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 ZFXP17010 805 aaPredicted RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 NR2C2P49116 596 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 SESN3P58005 492 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 PITX1P78337 314 aaPredicted RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 ENDOVQ8N8Q3 282 aaKnown RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 MCUR1Q96AQ8 359 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 FAM149B1Q96BN6 582 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 DERAQ9Y315 318 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 PTDSS1P48651 473 aaKnown RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 SESN2P58004 480 aaPredicted RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 SEMA5AQ13591 1074 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 FBXO47Q5MNV8 452 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 ATG16L1Q676U5 607 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 ADGRF2Q8IZF7 708 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 PDCD7Q8N8D1 485 aaKnown RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 FBXO41Q8TF61 875 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 TFB1MQ8WVM0 346 aaKnown RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 MTBPQ96DY7 904 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 C7orf26Q96N11 449 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 FAM167BQ9BTA0 163 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 TUBB6Q9BUF5 446 aa22.88■■□□□ 1.25
TTC3-210ENST00000450533 XAB2Q9HCS7 855 aaKnown RBP22.88■■□□□ 1.25
TTC3-210ENST00000450533 RBM47A0AV96 593 aaKnown RBP22.87■■□□□ 1.25
TTC3-210ENST00000450533 ZNF487B1APH4 448 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 MFSD11O43934 449 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 GSTA2P09210 222 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 OCRLQ01968 901 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 SNAPC2Q13487 334 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 KPNB1Q14974 876 aaKnown RBP22.87■■□□□ 1.25
TTC3-210ENST00000450533 TEX44Q53QW1 395 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 C4orf22Q6V702 233 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 OR6J1Q8NGC5 347 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 GCOM2Q9BZD3 368 aaPredicted RBP22.87■■□□□ 1.25
TTC3-210ENST00000450533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.87■■□□□ 1.254e-10■■■□□ 14.8
TTC3-210ENST00000450533 PPARGC1AQ9UBK2 798 aaKnown RBP22.87■■□□□ 1.25
TTC3-210ENST00000450533 AQP5P55064 265 aa22.87■■□□□ 1.25
TTC3-210ENST00000450533 CRYMQ14894 314 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms