RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 NPAS2Q99743 824 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 DRC3Q9H069 523 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 POMPQ9Y244 141 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SERPINE1P05121 402 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ITGA2BP08514 1039 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 CDKN2BP42772 138 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 PGGT1BP53609 377 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ACTR3P61158 418 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 LDLRAP1Q5SW96 308 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 RHBDF2Q6PJF5 856 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 CD101Q93033 1021 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 SEPHS2Q99611 448 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 NDUFA13Q9P0J0 144 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 CDH22Q9UJ99 828 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 A0A096LPK6 155 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 PIGNO95427 931 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
UBE3B-204ENST00000449510 TFPTP0C1Z6 253 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 NPR1P16066 1061 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 SPRP35270 261 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-204ENST00000449510 FDFT1P37268 417 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 EIF2B2P49770 351 aaKnown RBP12.75□□□□□ -0.37
UBE3B-204ENST00000449510 YWHAHQ04917 246 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-204ENST00000449510 TRAF2Q12933 501 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 RALGDSQ12967 914 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ITGADQ13349 1161 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ZACNQ401N2 412 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 PERM1Q5SV97 790 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ANKS1BQ7Z6G8 1248 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 KLHL23Q8NBE8 558 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 BORCS6Q96GS4 357 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 APOBEC3GQ9HC16 384 aaKnown RBP12.75□□□□□ -0.37
UBE3B-204ENST00000449510 SDR42E2A6NKP2 422 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 APOC4-APOC2K7ER74 178 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 E2F6O75461 281 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 APOC2P02655 101 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ITGAVP06756 1048 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ATICP31939 592 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 TRIM16LQ309B1 348 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 HEATR4Q86WZ0 1026 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 PQLC1Q8N2U9 271 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 C12orf29Q8N999 325 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ATP6V1E2Q96A05 226 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ROBO3Q96MS0 1386 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 MBOAT7Q96N66 472 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 LGMNQ99538 433 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
UBE3B-204ENST00000449510 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 FAM149AA5PLN7 773 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 LRCH4O75427 683 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 SERPINA6P08185 405 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CLCN3P51790 818 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 OCA2Q04671 838 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 NSUN2Q08J23 767 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MYBPC2Q14324 1141 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 PTPN20Q4JDL3 420 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MON1BQ7L1V2 547 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 AMIGO3Q86WK7 504 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CCDC60Q8IWA6 550 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 SIX6OS1Q8N1H7 587 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 PHTF2Q8N3S3 785 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 RMND5BQ96G75 393 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 VPS50Q96JG6 964 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 LINC00854A0A1B0GVQ3 168 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 SYCE1LA8MT33 242 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MOCS2O96007 188 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 APBA3O96018 575 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 UNGP13051 313 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MMP8P22894 467 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ME2P23368 584 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 GPR107Q5VW38 600 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 KLHL25Q9H0H3 589 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 COG4Q9H9E3 785 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 WDR41Q9HAD4 459 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF180Q9UJW8 692 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MYH3P11055 1940 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms