RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 IGLV3-27P01718 113 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 SLC2A3P11169 496 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 MIPP30301 263 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 CCR1P32246 355 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 CXCR3P49682 368 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 RING1Q06587 406 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 HADHQ16836 314 aaKnown RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 BRMS1LQ5PSV4 323 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 SCYL2Q6P3W7 929 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 POTEHQ6S545 545 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 FAM131BQ86XD5 332 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 MAFAQ8NHW3 353 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 RNF34Q969K3 372 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 PLD4Q96BZ4 506 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 SLC39A13Q96H72 371 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 FCRL2Q96LA5 508 aaPredicted RBP15.22■□□□□ 0.03
SHANK2-210ENST00000449116 ZSWIM3Q96MP5 696 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 WDCPQ9H6R7 721 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 18.9
SHANK2-210ENST00000449116 SMPD4Q9NXE4 827 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 AMFRQ9UKV5 643 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 CDH7Q9ULB5 785 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 USP18Q9UMW8 372 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 HYOU1Q9Y4L1 999 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 BRWD1Q9NSI6 2320 aa15.22■□□□□ 0.03
SHANK2-210ENST00000449116 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 MBTPS2O43462 519 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 APOEP02649 317 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 HMBSP08397 361 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 SSR1P43307 286 aaKnown RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 AIF1P55008 147 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 TAS2R40P59535 323 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 SLC25A11Q02978 314 aaKnown RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 ARL13BQ3SXY8 428 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 ZNF569Q5MCW4 686 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 NUGGCQ68CJ6 796 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 NT5DC3Q86UY8 548 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 UNC45BQ8IWX7 931 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 UBE2Q2Q8WVN8 375 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 USP13Q92995 863 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 NTAN1Q96AB6 310 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 SMG9Q9H0W8 520 aaKnown RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 GKN1Q9NS71 199 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 TDP1Q9NUW8 608 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 ARHGEF38Q9NXL2 777 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 PCSK1NQ9UHG2 260 aa15.21■□□□□ 0.03
SHANK2-210ENST00000449116 ZFP37Q9Y6Q3 630 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-210ENST00000449116 KCNU1A8MYU2 1149 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 LEFTY2O00292 366 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 PSTPIP1O43586 416 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 STC2O76061 302 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 FTCDO95954 541 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 IRF1P10914 325 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 TCF4P15884 667 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 IL1R2P27930 398 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-210ENST00000449116 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
SHANK2-210ENST00000449116 KCNQ1P51787 676 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 GNG11P61952 73 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 ZXDBP98169 803 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 MTA1Q13330 715 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 LEXMQ3ZCV2 418 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 ARID3BQ8IVW6 561 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-210ENST00000449116 RHOT1Q8IXI2 618 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 SMARCD2Q92925 531 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 CD101Q93033 1021 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 ASB16Q96NS5 453 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 PEBP4Q96S96 227 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 MYADMQ96S97 322 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 TKTL2Q9H0I9 626 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 KIF9Q9HAQ2 790 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 REV3LO60673 3130 aa15.2■□□□□ 0.02
SHANK2-210ENST00000449116 DENND4AQ7Z401 1863 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 KRT7P08729 469 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 TCF3P15923 654 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 ADRA1BP35368 520 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 SCAPQ12770 1279 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 BOLA3Q53S33 107 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 FAM78AQ5JUQ0 283 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 OTOP3Q7RTS5 596 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 POLNQ7Z5Q5 900 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 PSTKQ8IV42 348 aaKnown RBP15.19■□□□□ 0.02
SHANK2-210ENST00000449116 CELF5Q8N6W0 485 aaKnown RBP15.19■□□□□ 0.02
SHANK2-210ENST00000449116 ATP6V0D2Q8N8Y2 350 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 ADAMTS19Q8TE59 1207 aa15.19■□□□□ 0.02
SHANK2-210ENST00000449116 SH3RF2Q8TEC5 729 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms