RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SMYD4Q8IYR2 804 aaPredicted RBP16.28■□□□□ 0.2
TRA2A-203ENST00000448549 ARHGAP18Q8N392 663 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 TTC39CQ8N584 583 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
TRA2A-203ENST00000448549 FOXJ1Q92949 421 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 TOE1Q96GM8 510 aaKnown RBP16.28■□□□□ 0.2
TRA2A-203ENST00000448549 FAXDC2Q96IV6 333 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 PIWIL1Q96J94 861 aaKnown RBP16.28■□□□□ 0.2
TRA2A-203ENST00000448549 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
TRA2A-203ENST00000448549 KLK13Q9UKR3 277 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 STRIP2Q9ULQ0 834 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 NEUROG3Q9Y4Z2 214 aa16.28■□□□□ 0.2
TRA2A-203ENST00000448549 A0A1W2PQ27 194 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 A0A1W2PQ64 194 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 NPC1O15118 1278 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 ZNF202O95125 648 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 CYBBP04839 570 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 GNSP15586 552 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 TKTL1P51854 596 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 SLC8A3P57103 927 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 ENPP2Q13822 863 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 EDRF1Q3B7T1 1238 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 ANKS1BQ7Z6G8 1248 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 TMPRSS6Q8IU80 811 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 DDI1Q8WTU0 396 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 UCMAQ8WVF2 138 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 CAMK1GQ96NX5 476 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 GPR174Q9BXC1 333 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 ITM2CQ9NQX7 267 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 ELOVL2Q9NXB9 296 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 WSB2Q9NYS7 404 aaPredicted RBP16.27■□□□□ 0.2
TRA2A-203ENST00000448549 USP36Q9P275 1121 aaKnown RBP16.27■□□□□ 0.2
TRA2A-203ENST00000448549 SUSD2Q9UGT4 822 aa16.27■□□□□ 0.2
TRA2A-203ENST00000448549 TMEM8BA6NDV4 472 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 MEI4A8MW99 385 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 KCNJ18B7U540 433 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 TULP2O00295 520 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 CETN3O15182 167 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 SH3BP5O60239 455 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 STX10O60499 249 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 SYNCRIPO60506 623 aaKnown RBP16.26■□□□□ 0.19
TRA2A-203ENST00000448549 ZBED1O96006 694 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 EPB41P11171 864 aaKnown RBP16.26■□□□□ 0.19
TRA2A-203ENST00000448549 NCAM1P13591 858 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 TPMTP51580 245 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 ZNF132P52740 706 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 ZNF234Q14588 700 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 PM20D1Q6GTS8 502 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 CPXM2Q8N436 756 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 SORCS1Q8WY21 1168 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 ULBP1Q9BZM6 244 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 CIPCQ9C0C6 399 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 MSRB2Q9Y3D2 182 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 CHD6Q8TD26 2715 aa16.26■□□□□ 0.19
TRA2A-203ENST00000448549 TNRC6BQ9UPQ9 1833 aaKnown RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 H0Y626 953 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 TSPAN3O60637 253 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 GJB3O75712 270 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 TRIM16O95361 564 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 PRKCHP24723 683 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 RDXP35241 583 aaKnown RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 PDE4CQ08493 712 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 SLC14A1Q13336 389 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 EIF4HQ15056 248 aaKnown RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 CBWD6Q4V339 395 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 CBWD3Q5JTY5 395 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 CBWD5Q5RIA9 395 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 TCERG1LQ5VWI1 586 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 TMEM215Q68D42 235 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 BHLHA9Q7RTU4 235 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 CACUL1Q86Y37 369 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 CHCHD4Q8N4Q1 142 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 ZCCHC14Q8WYQ9 949 aaKnown RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 DNASE2BQ8WZ79 361 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 PRCCQ92733 491 aaPredicted RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 SLC2A11Q9BYW1 496 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
TRA2A-203ENST00000448549 MIR1-1HGQ9H1L0 117 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 TSPAN16Q9UKR8 245 aa16.25■□□□□ 0.19
TRA2A-203ENST00000448549 SRRM3A6NNA2 597 aaPredicted RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 EPHX1P07099 455 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 OXTRP30559 389 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 COPAP53621 1224 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 GRIK2Q13002 908 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 HNRNPDQ14103 355 aaKnown RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 TRIP4Q15650 581 aaPredicted RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 TRIP6Q15654 476 aaKnown RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 SERPINA13PQ6UXR4 307 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 FMNL3Q8IVF7 1028 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 FAM217AQ8IXS0 508 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 ZCCHC9Q8N567 271 aaKnown RBP16.24■□□□□ 0.19
TRA2A-203ENST00000448549 CADM4Q8NFZ8 388 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 UBA3Q8TBC4 463 aa16.24■□□□□ 0.19
TRA2A-203ENST00000448549 EDEM1Q92611 657 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms