RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 FYB2Q5VWT5 728 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 PMF1Q6P1K2 205 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 MLKLQ8NB16 471 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 UCMAQ8WVF2 138 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 HSFY1Q96LI6 401 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 SMOC1Q9H4F8 434 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 SFMBT1Q9UHJ3 866 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 FBXO10Q9UK96 956 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 SLC27A6Q9Y2P4 619 aa20.58■□□□□ 0.89
VCP-203ENST00000448530 MED7O43513 233 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 FBXO21O94952 628 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 ZNF132P52740 706 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 ENOSF1Q7L5Y1 443 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 DDX1Q92499 740 aaKnown RBP20.57■□□□□ 0.88
VCP-203ENST00000448530 FAM81BQ96LP2 452 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 KREMEN1Q96MU8 473 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 ACOX2Q99424 681 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 ZSWIM1Q9BR11 485 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 HCN2Q9UL51 889 aa20.57■□□□□ 0.88
VCP-203ENST00000448530 GFRA2O00451 464 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 CALCAP01258 141 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 LTFP02788 710 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 GABRG2P18507 467 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 LIMK1P53667 647 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 MFAP3P55082 362 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 ZNF445P59923 1031 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 MPPE1Q53F39 396 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 ANKS1BQ7Z6G8 1248 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 IPO4Q8TEX9 1081 aaKnown RBP20.56■□□□□ 0.88
VCP-203ENST00000448530 CRACR2AQ9BSW2 395 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 SLC2A11Q9BYW1 496 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 MIS12Q9H081 205 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 ST7Q9NRC1 585 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 CACNA2D2Q9NY47 1150 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 PLXND1Q9Y4D7 1925 aa20.56■□□□□ 0.88
VCP-203ENST00000448530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 A0A1W2PQF6 199 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 KHNYNO15037 678 aaKnown RBP20.55■□□□□ 0.88
VCP-203ENST00000448530 NPC1O15118 1278 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 LATS1O95835 1130 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 ANP32AP39687 249 aaKnown RBP20.55■□□□□ 0.88
VCP-203ENST00000448530 MTIF2P46199 727 aaKnown RBP20.55■□□□□ 0.88
VCP-203ENST00000448530 ARID5AQ03989 594 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 STARD3Q14849 445 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 MAP7D1Q3KQU3 841 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 STPG1Q5TH74 334 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 MSANTD2Q6P1R3 559 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 SLC36A4Q6YBV0 504 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 GBP6Q6ZN66 633 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 FAM217AQ8IXS0 508 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 TMEFF1Q8IYR6 380 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 PIGKQ92643 395 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 GABRG3Q99928 467 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 CALCOCO1Q9P1Z2 691 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 CNTN6Q9UQ52 1028 aa20.55■□□□□ 0.88
VCP-203ENST00000448530 SART1O43290 800 aaKnown RBP20.54■□□□□ 0.88
VCP-203ENST00000448530 MSI1O43347 362 aaKnown RBP20.54■□□□□ 0.88
VCP-203ENST00000448530 TSPAN3O60637 253 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 LETM1O95202 739 aaPredicted RBP20.54■□□□□ 0.88
VCP-203ENST00000448530 KCNA4P22459 653 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 USP8P40818 1118 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 ACADSBP45954 432 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 GEN1Q17RS7 908 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 ADGRF1Q5T601 910 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 RNF43Q68DV7 783 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 TCEAL6Q6IPX3 200 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 TRIM65Q6PJ69 517 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 UNC45BQ8IWX7 931 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 TCEAL3Q969E4 200 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 ERLEC1Q96DZ1 483 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 CLSTN2Q9H4D0 955 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 RXFP3Q9NSD7 469 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 RAD54BQ9Y620 910 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 STON1Q9Y6Q2 735 aa20.54■□□□□ 0.88
VCP-203ENST00000448530 AP5Z1O43299 807 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 THAP12O43422 761 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 ZNF217O75362 1048 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 GABBR2O75899 941 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 GNA15P30679 374 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 DPP6P42658 865 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 SLC11A2P49281 568 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 RPL6Q02878 288 aaKnown RBP20.53■□□□□ 0.88
VCP-203ENST00000448530 EIF4HQ15056 248 aaKnown RBP20.53■□□□□ 0.88
VCP-203ENST00000448530 PPM1JQ5JR12 505 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 SPDYCQ5MJ68 293 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 NUGGCQ68CJ6 796 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 KIAA1211LQ6NV74 962 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 ARMCX6Q7L4S7 300 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 FAM114A1Q8IWE2 563 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 FRMD1Q8N878 549 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 CLEC4CQ8WTT0 213 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 FAM149B1Q96BN6 582 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 TMA16Q96EY4 203 aaKnown RBP20.53■□□□□ 0.88
VCP-203ENST00000448530 P2RY11Q96G91 374 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 EDEM2Q9BV94 578 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 TRIM62Q9BVG3 475 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 CIPCQ9C0C6 399 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 DACH1Q9UI36 760 aa20.53■□□□□ 0.88
VCP-203ENST00000448530 MBD1Q9UIS9 605 aaPredicted RBP20.53■□□□□ 0.88
VCP-203ENST00000448530 SPTBN2O15020 2390 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms