RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 NDST1P52848 882 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 UBAP2LQ14157 1087 aaKnown RBP19.72■□□□□ 0.75
SDCBP-204ENST00000447182 STILQ15468 1287 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 CA9Q16790 459 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 FASTKD1Q53R41 847 aaKnown RBP19.72■□□□□ 0.75
SDCBP-204ENST00000447182 STEAP4Q687X5 459 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 IZUMO2Q6UXV1 221 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 TRIM50Q86XT4 487 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 PPP1R12CQ9BZL4 782 aa19.72■□□□□ 0.75
SDCBP-204ENST00000447182 PIK3R2O00459 728 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 KLHL2O95198 593 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 STAU1O95793 577 aaKnown RBP19.71■□□□□ 0.75
SDCBP-204ENST00000447182 SDC4P31431 198 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 L1CAMP32004 1257 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 TNFAIP2Q03169 654 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 SEMA5AQ13591 1074 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 SH3D19Q5HYK7 790 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 RABGAP1LQ5R372 815 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 LBX2Q6XYB7 198 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 ZCCHC23Q6ZST2 131 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 MARK2Q7KZI7 788 aaKnown RBP19.71■□□□□ 0.75
SDCBP-204ENST00000447182 RIOX2Q8IUF8 465 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 TRIM56Q9BRZ2 755 aaKnown RBP19.71■□□□□ 0.75
SDCBP-204ENST00000447182 STK32BQ9NY57 414 aa19.71■□□□□ 0.75
SDCBP-204ENST00000447182 MAP3K6O95382 1288 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 LYNP07948 512 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 GJB1P08034 283 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 IQCF3P0C7M6 154 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 MCF2P10911 925 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 CYP2F1P24903 491 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 NR2C2P49116 596 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 HNRNPDQ14103 355 aaKnown RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 HIC1Q14526 733 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 FAM187BQ17R55 369 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 TEDDM1Q5T9Z0 273 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 DPH6Q7L8W6 267 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 KHSRPQ92945 711 aaKnown RBP eCLIP19.7■□□□□ 0.745e-6■■■■□ 22.3
SDCBP-204ENST00000447182 KLRG1Q96E93 195 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 ZNF778Q96MU6 729 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 NT5C1AQ9BXI3 368 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 PRMT7Q9NVM4 692 aaPredicted RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 PPM1HQ9ULR3 514 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 FZD1Q9UP38 647 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 BUD23O43709 281 aaKnown RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 CCNT2O60583 730 aaKnown RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 GLRA3O75311 464 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 FGF3P11487 239 aaPredicted RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 ZFXP17010 805 aaPredicted RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 DESP17661 470 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 CDC16Q13042 620 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 PKDCCQ504Y2 493 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 PPP1R14CQ8TAE6 165 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 ZNF668Q96K58 619 aaPredicted RBP19.7■□□□□ 0.74
SDCBP-204ENST00000447182 TTC1Q99614 292 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 FAM96AQ9H5X1 160 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 EMCNQ9ULC0 261 aa19.7■□□□□ 0.74
SDCBP-204ENST00000447182 TOP3BO95985 862 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 C6orf222P0C671 652 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 MLNP12872 115 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 HDAC4P56524 1084 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SLC6A3Q01959 620 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 DPYSL2Q16555 572 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 NOL9Q5SY16 702 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 PPP2R3CQ969Q6 453 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 QKIQ96PU8 341 aaKnown RBP eCLIP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SLC4A5Q9BY07 1137 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 S100A14Q9HCY8 104 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 ZDHHC7Q9NXF8 308 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 GTF2IRD1Q9UHL9 959 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 APOBEC2Q9Y235 224 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 DNAJC16Q9Y2G8 782 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 WDR90Q96KV7 1748 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 ITM2AO43736 263 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SNUPNO95149 360 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 ARIH2O95376 493 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 MYL4P12829 197 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SLC1A6P48664 564 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 GMPSP49915 693 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SLC26A2P50443 739 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SARNPP82979 210 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 NIPAL4Q0D2K0 466 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SLC10A2Q12908 348 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 RBBP5Q15291 538 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 EFHC1Q5JVL4 640 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 CELF3Q5SZQ8 465 aaKnown RBP19.69■□□□□ 0.74
SDCBP-204ENST00000447182 EFCAB12Q6NXP0 572 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 TMEM110Q86TL2 294 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 SESTD1Q86VW0 696 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 NCAPG2Q86XI2 1143 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 FGD4Q96M96 766 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 APOL6Q9BWW8 343 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 IFT122Q9HBG6 1241 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 ITGA11Q9UKX5 1188 aa19.69■□□□□ 0.74
SDCBP-204ENST00000447182 NOP56O00567 594 aaKnown RBP19.68■□□□□ 0.74
SDCBP-204ENST00000447182 PLIN3O60664 434 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 ALDOAP04075 364 aaKnown RBP19.68■□□□□ 0.74
SDCBP-204ENST00000447182 SETSIPP0DME0 302 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 RGS7P49802 495 aa19.68■□□□□ 0.74
SDCBP-204ENST00000447182 GBE1Q04446 702 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms