RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 XIRP2A4UGR9 3374 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 PRPSAP2O60256 369 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 LRCH4O75427 683 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 SLC2A3P11169 496 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 TNNT1P13805 278 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 PCK1P35558 622 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 HARS2P49590 506 aaKnown RBP18.1■□□□□ 0.49
SGCE-206ENST00000445866 NNTQ13423 1086 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 EIF4EBP2Q13542 120 aaPredicted RBP18.1■□□□□ 0.49
SGCE-206ENST00000445866 HADHQ16836 314 aaKnown RBP18.1■□□□□ 0.49
SGCE-206ENST00000445866 LEXMQ3ZCV2 418 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 FAM78AQ5JUQ0 283 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 C11orf63Q6NUN7 778 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 LRRC57Q8N9N7 239 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 SMARCD2Q92925 531 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 USP13Q92995 863 aaPredicted RBP18.1■□□□□ 0.49
SGCE-206ENST00000445866 SLC39A13Q96H72 371 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 ALS2CR12Q96Q35 445 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 ARHGAP26Q9UNA1 814 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 CAPN6Q9Y6Q1 641 aa18.1■□□□□ 0.49
SGCE-206ENST00000445866 ZXDBP98169 803 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ZNF569Q5MCW4 686 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 OTOP3Q7RTS5 596 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ZSCAN30Q86W11 494 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 UNC45BQ8IWX7 931 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 TRIM58Q8NG06 486 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 SH3RF2Q8TEC5 729 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ZFRQ96KR1 1074 aaKnown RBP18.09■□□□□ 0.49
SGCE-206ENST00000445866 CFAP97Q9P2B7 532 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 USP18Q9UMW8 372 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 CCL26Q9Y258 94 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 REV3LO60673 3130 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 LEFTY2O00292 366 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 FTCDO95954 541 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 LAMP2P13473 410 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 TCF4P15884 667 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 WEE1P30291 646 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ADRA1BP35368 520 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 VIPR2P41587 438 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 TFF2Q03403 129 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 RING1Q06587 406 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 PPP2R5DQ14738 602 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ARL13BQ3SXY8 428 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 PEX26Q7Z412 305 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 SLFN11Q7Z7L1 901 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ACSF2Q96CM8 615 aaPredicted RBP18.09■□□□□ 0.49
SGCE-206ENST00000445866 FCRL2Q96LA5 508 aaPredicted RBP18.09■□□□□ 0.49
SGCE-206ENST00000445866 ASB16Q96NS5 453 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 TKTL2Q9H0I9 626 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ZWILCHQ9H900 591 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 PRDM6Q9NQX0 595 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 AMFRQ9UKV5 643 aa18.09■□□□□ 0.49
SGCE-206ENST00000445866 ZFP37Q9Y6Q3 630 aaPredicted RBP18.09■□□□□ 0.49
SGCE-206ENST00000445866 KCNU1A8MYU2 1149 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 STC2O76061 302 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 PRAMEF12O95522 483 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 MOCS2O96007 188 aaPredicted RBP18.08■□□□□ 0.48
SGCE-206ENST00000445866 APOEP02649 317 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.48
SGCE-206ENST00000445866 BRMS1LQ5PSV4 323 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 NUGGCQ68CJ6 796 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 PTCRAQ6ISU1 281 aaPredicted RBP18.08■□□□□ 0.48
SGCE-206ENST00000445866 CELF5Q8N6W0 485 aaKnown RBP18.08■□□□□ 0.48
SGCE-206ENST00000445866 ST13P5Q8NFI4 369 aaPredicted RBP18.08■□□□□ 0.48
SGCE-206ENST00000445866 WBP2Q969T9 261 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 PLD4Q96BZ4 506 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 DCLK3Q9C098 648 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 SH3BP1Q9Y3L3 701 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 PLXNA3P51805 1871 aa18.08■□□□□ 0.48
SGCE-206ENST00000445866 SPTBN5Q9NRC6 3674 aaKnown RBP18.07■□□□□ 0.48
SGCE-206ENST00000445866 IGLV3-27P01718 113 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 IL1R2P27930 398 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 TAS2R40P59535 323 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 GNG11P61952 73 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 PUS10Q3MIT2 529 aaKnown RBP18.07■□□□□ 0.48
SGCE-206ENST00000445866 KCNT1Q5JUK3 1230 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 ERMARDQ5T6L9 678 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 DDX42Q86XP3 938 aaKnown RBP eCLIP18.07■□□□□ 0.48
SGCE-206ENST00000445866 DENND1CQ8IV53 801 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 ATP6V0D2Q8N8Y2 350 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 ADAMTS19Q8TE59 1207 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 TMPRSS4Q9NRS4 437 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 LSM7Q9UK45 103 aaKnown RBP18.07■□□□□ 0.48
SGCE-206ENST00000445866 FAM50BQ9Y247 325 aa18.07■□□□□ 0.48
SGCE-206ENST00000445866 SCAMP3O14828 347 aaKnown RBP18.06■□□□□ 0.48
SGCE-206ENST00000445866 KLKB1P03952 638 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 MSNP26038 577 aaKnown RBP18.06■□□□□ 0.48
SGCE-206ENST00000445866 CORO1AP31146 461 aaKnown RBP18.06■□□□□ 0.48
SGCE-206ENST00000445866 GJC1P36383 396 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 SLC11A2P49281 568 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 ATP13A4Q4VNC1 1196 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 ZFYVE27Q5T4F4 411 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 TANGO2Q6ICL3 276 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 HTR3DQ70Z44 454 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 NT5DC3Q86UY8 548 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 RHOT1Q8IXI2 618 aa18.06■□□□□ 0.48
SGCE-206ENST00000445866 RPGRIP1Q96KN7 1286 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms