RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CACNA2D3Q8IZS8 1091 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 RNF149Q8NC42 400 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LARP4BQ92615 738 aaKnown RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 USP7Q93009 1102 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 LINC00597Q9H2U6 94 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 PREBQ9HCU5 417 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 G3BP2Q9UN86 482 aaKnown RBP6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 NUB1Q9Y5A7 615 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 TTC41PQ6P2S7 1318 aa6.82□□□□□ -1.32
BRAFP1-201ENST00000445336 DRGXA6NNA5 263 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ALX3O95076 343 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 PDGFAP04085 211 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 RARAP10276 462 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ATF6P18850 670 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 TCN2P20062 427 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 RAB15P59190 212 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 NUGGCQ68CJ6 796 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 CCER1Q8TC90 406 aaPredicted RBP6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ROBO4Q8WZ75 1007 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ZCWPW1Q9H0M4 648 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 CD93Q9NPY3 652 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 SLAMF7Q9NQ25 335 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 NBEAL1Q6ZS30 2694 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 FSBPO95073 299 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 FGAP02671 866 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 CYP11A1P05108 521 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 CYP3A5P20815 502 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 PSMC5P62195 406 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 SLFN5Q08AF3 891 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 USP37Q86T82 979 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ZSCAN30Q86W11 494 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 TRMT2AQ8IZ69 625 aaKnown RBP6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 FAM131CQ96AQ9 280 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 DPYSL5Q9BPU6 564 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 CRISPLD1Q9H336 500 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 PDE7BQ9NP56 450 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 USP25Q9UHP3 1055 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ANK2Q01484 3957 aa6.81□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 SLC7A4O43246 635 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 ZG16O60844 167 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 TADA3O75528 432 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 DDAH1O94760 285 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 SEMA5AQ13591 1074 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 KCNB1Q14721 858 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 DCAF10Q5QP82 559 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 ALKAL1Q6UXT8 129 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 NEK8Q86SG6 692 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 TEKT3Q9BXF9 490 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 PLA2G12AQ9BZM1 189 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 MKRN2Q9H000 416 aaKnown RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 EPB41L5Q9HCM4 733 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 KLK14Q9P0G3 267 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 PISDQ9UG56 409 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 ZNHIT2Q9UHR6 403 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 CYP46A1Q9Y6A2 500 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 SLCO1B1Q9Y6L6 691 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 NIPBLQ6KC79 2804 aaeCLIP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 CITO14578 2027 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 B4E171 279 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 CKMP06732 381 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 NFKBIAP25963 317 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 LRPAP1P30533 357 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 TSPAN7P41732 249 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 CDCA2Q69YH5 1023 aaPredicted RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 TXNDC8Q6A555 127 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 OTUD6AQ7L8S5 288 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 UBR7Q8N806 425 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 RBBP8NLQ8NC74 664 aaPredicted RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 SPRY4Q9C004 299 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 GPN2Q9H9Y4 310 aaPredicted RBP6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 FOXJ2Q9P0K8 574 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 KCNN3Q9UGI6 736 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 PCDHGA6Q9Y5G7 932 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 LAMA1P25391 3075 aa6.8□□□□□ -1.32
BRAFP1-201ENST00000445336 K7ESM1 405 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 DDX39AO00148 427 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 ATP2C2O75185 946 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CLK2P49760 499 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 HNRNPKP61978 463 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 MIB1Q86YT6 1006 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 SLFN12Q8IYM2 578 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 DCP1BQ8IZD4 617 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 IL22RA1Q8N6P7 574 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 C3orf58Q8NDZ4 430 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 MTFMTQ96DP5 389 aaKnown RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 ST6GALNAC2Q9UJ37 374 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 TIMM13Q9Y5L4 95 aaPredicted RBP6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CENPEQ02224 2701 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 INO80B-WBP1J3KQ70 363 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 CISD3P0C7P0 127 aa6.79□□□□□ -1.32
BRAFP1-201ENST00000445336 ATP2C1P98194 919 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms