RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 ADAMTS9Q9P2N4 1935 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
TTC28-203ENST00000442232 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 IGHV1OR15-9A0A0B4J2B8 117 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 BICDL2A1A5D9 508 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 ENGP17813 658 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 ZNF132P52740 706 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 MFAP3P55082 362 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 ZNF445P59923 1031 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 GFPT1Q06210 699 aaPredicted RBP12.32□□□□□ -0.44
TTC28-203ENST00000442232 ZNF33AQ06730 810 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 PDE4CQ08493 712 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 EIF4HQ15056 248 aaKnown RBP12.32□□□□□ -0.44
TTC28-203ENST00000442232 SYCP2LQ5T4T6 812 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 FYB2Q5VWT5 728 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 KLHL10Q6JEL2 608 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 SLC23A3Q6PIS1 610 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 RGL4Q8IZJ4 473 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 CPXM2Q8N436 756 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 DEFB119Q8N690 84 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 FOXJ1Q92949 421 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 DHTKD1Q96HY7 919 aaPredicted RBP12.32□□□□□ -0.44
TTC28-203ENST00000442232 GTPBP2Q9BX10 602 aaKnown RBP12.32□□□□□ -0.44
TTC28-203ENST00000442232 SLC2A11Q9BYW1 496 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 SUSD2Q9UGT4 822 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 PILRBQ9UKJ0 227 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 SLC6A14Q9UN76 642 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 HBS1LQ9Y450 684 aaKnown RBP12.32□□□□□ -0.44
TTC28-203ENST00000442232 PCDHB4Q9Y5E5 795 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 RAD54BQ9Y620 910 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 STON1Q9Y6Q2 735 aa12.32□□□□□ -0.44
TTC28-203ENST00000442232 MAP1BP46821 2468 aaKnown RBP12.31□□□□□ -0.44
TTC28-203ENST00000442232 LAMA1P25391 3075 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 MEI4A8MW99 385 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 KLKB1P03952 638 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 SERPINF2P08697 491 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 PAEPP09466 180 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 ACADMP11310 421 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 CEACAM1P13688 526 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 LCP1P13796 627 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
TTC28-203ENST00000442232 FMO5P49326 533 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
TTC28-203ENST00000442232 SHC2P98077 582 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 STILQ15468 1287 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 MPPE1Q53F39 396 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 PM20D1Q6GTS8 502 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 TMEM270Q6UE05 265 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 ENGASEQ8NFI3 743 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
TTC28-203ENST00000442232 HSPA12BQ96MM6 686 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 PRDM16Q9HAZ2 1276 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 CNGB3Q9NQW8 809 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 ABCC13Q9NSE7 274 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 FBXO10Q9UK96 956 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 HCN2Q9UL51 889 aa12.31□□□□□ -0.44
TTC28-203ENST00000442232 ASCC3Q8N3C0 2202 aaKnown RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 M0QYV0 167 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 O00370 1275 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 OPHN1O60890 802 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 LATS1O95835 1130 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 SYPP08247 313 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 GNSP15586 552 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 FOXC1Q12948 553 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 TRIP4Q15650 581 aaPredicted RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 GEN1Q17RS7 908 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 BSPRYQ5W0U4 402 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 SPATA20Q8TB22 786 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 UBA3Q8TBC4 463 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 KCTD13Q8WZ19 329 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 EDEM1Q92611 657 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 MRGPRX1Q96LB2 322 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 TMEM74BQ9NUR3 256 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 ELOVL2Q9NXB9 296 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 THAP10Q9P2Z0 257 aaPredicted RBP12.3□□□□□ -0.44
TTC28-203ENST00000442232 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
TTC28-203ENST00000442232 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 TULP2O00295 520 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 GIPC1O14908 333 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 P4HA2O15460 535 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 TIMM44O43615 452 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 TSPAN3O60637 253 aa12.29□□□□□ -0.44
TTC28-203ENST00000442232 GNA14O95837 355 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms