RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 AMFRQ9UKV5 643 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 BACE2Q9Y5Z0 518 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 TMCO5BA8MYB1 307 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 PPEF2O14830 753 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 UNGP13051 313 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SCTRP47872 440 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 DR1Q01658 176 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 RNF19BQ6ZMZ0 732 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAATS1Q7Z4T9 603 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 PASD1Q8IV76 773 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 B3GALNT2Q8NCR0 500 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 DDI1Q8WTU0 396 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 PPP1R10Q96QC0 940 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 ACBD6Q9BR61 282 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MCM8Q9UJA3 840 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 NOVA2Q9UNW9 492 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC12A8A0AV02 714 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 MYBPHLA2RUH7 354 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 RARAP10276 462 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 DNA2P51530 1060 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CNGA2Q16280 664 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 PREPLQ4J6C6 727 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GPR149Q86SP6 731 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ARID3BQ8IVW6 561 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ARHGAP18Q8N392 663 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 FGF13Q92913 245 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 FMO2Q99518 471 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 SMYD3Q9H7B4 428 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CYP3A43Q9HB55 503 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 NCDNQ9UBB6 729 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CLUHO75153 1309 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 EP300Q09472 2414 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 PLXNA1Q9UIW2 1896 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC38A8A6NNN8 435 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 RECQLP46063 649 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 PMS2P54278 862 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 DSC1Q08554 894 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 PTP4A2Q12974 167 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF211Q13398 564 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 BIRC2Q13490 618 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GOLGA7BQ2TAP0 167 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 TPGS1Q6ZTW0 290 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 RHOT2Q8IXI1 618 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 NUP93Q8N1F7 819 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 DDX50Q9BQ39 737 aaKnown RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CLSTN3Q9BQT9 956 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 SIK2Q9H0K1 926 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ACP6Q9NPH0 428 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 HCFC1R1Q9NWW0 138 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 FNIP2Q9P278 1114 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CAPN7Q9Y6W3 813 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 TCRBV5S1A1TA0A578 114 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CLDN5O00501 218 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 RTN2O75298 545 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GNA15P30679 374 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CHRNA3P32297 505 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 MGAT5Q09328 741 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GRSF1Q12849 480 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAF10Q12962 218 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC29A2Q14542 456 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 STARD3Q14849 445 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 STILQ15468 1287 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ASRGL1Q7L266 308 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 EXOC3L1Q86VI1 746 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CPA6Q8N4T0 437 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ARL14EPQ8N8R7 260 aaPredicted RBP7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 PDZD8Q8NEN9 1154 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 VN1R2Q8NFZ6 395 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 BPIFB1Q8TDL5 484 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 ERLEC1Q96DZ1 483 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 GKN1Q9NS71 199 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CISHQ9NSE2 258 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 CDH22Q9UJ99 828 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 SPTBN2O15020 2390 aa7.67□□□□□ -1.18
CDC42BPA-208ENST00000442054 WDR27A2RRH5 827 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 MTMR11A4FU01 709 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 MIF4GDA9UHW6 222 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 E7EVH7 732 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 C5orf67F2Z3F1 127 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SYNCRIPO60506 623 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATP2C2O75185 946 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 RARGP13631 454 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CCDC130P13994 396 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 COMTP21964 271 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 XPAP23025 273 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATP5C1P36542 298 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 COILP38432 576 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 NSFP46459 744 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ITIH4Q14624 930 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TXNDC8Q6A555 127 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TPRG1Q6ZUI0 275 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 UBR7Q8N806 425 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 RBBP8NLQ8NC74 664 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TMEM35BQ8NCS4 154 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms