RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 PTGIRP43119 386 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 SLC7A5Q01650 507 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 PPP6R3Q5H9R7 873 aaPredicted RBP29■■■□□ 2.23
CGREF1-207ENST00000440612 SLC39A13Q96H72 371 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 FAM118BQ9BPY3 351 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 PARD6BQ9BYG5 372 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 WDCPQ9H6R7 721 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 CCSER2Q9H7U1 834 aa29■■■□□ 2.23
CGREF1-207ENST00000440612 CWC15Q9P013 229 aaKnown RBP29■■■□□ 2.23
CGREF1-207ENST00000440612 TARSL2A2RTX5 802 aaKnown RBP28.99■■■□□ 2.23
CGREF1-207ENST00000440612 BHMG1C9JSJ3 638 aaPredicted RBP28.99■■■□□ 2.23
CGREF1-207ENST00000440612 FAM72CH0Y354 149 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 H3BNC9 293 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 DYNC1I1O14576 645 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 CLCN4P51793 760 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 CCNG2Q16589 344 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 ARTNQ5T4W7 220 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 FAM72AQ5TYM5 149 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 FAM72DQ6L9T8 149 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 TMEM150AQ86TG1 271 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 FAM72BQ86X60 149 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 CSPG4P5Q96PW8 444 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 TKTL2Q9H0I9 626 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 KCNJ1P48048 391 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 SLC9A4Q6AI14 798 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 KREMEN2Q8NCW0 462 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 SERPINB11Q96P15 392 aa28.99■■■□□ 2.23
CGREF1-207ENST00000440612 SAE1Q9UBE0 346 aaPredicted RBP28.99■■■□□ 2.23
CGREF1-207ENST00000440612 KCNU1A8MYU2 1149 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 FNTAP49354 379 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 EPHB3P54753 998 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 DYNLT1P63172 113 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 PPP2R5DQ14738 602 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 VEPH1Q14D04 833 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 EFHC2Q5JST6 749 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 CCDC137Q6PK04 289 aaKnown RBP28.98■■■□□ 2.23
CGREF1-207ENST00000440612 SND1Q7KZF4 910 aaKnown RBP eCLIP28.98■■■□□ 2.23
CGREF1-207ENST00000440612 RFX6Q8HWS3 928 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 PLD5Q8N7P1 536 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 PDZD8Q8NEN9 1154 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 PLEKHA4Q9H4M7 779 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 ZNF334Q9HCZ1 680 aaPredicted RBP28.98■■■□□ 2.23
CGREF1-207ENST00000440612 RCOR3Q9P2K3 495 aaPredicted RBP28.98■■■□□ 2.23
CGREF1-207ENST00000440612 RAB21Q9UL25 225 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 TLR6Q9Y2C9 796 aa28.98■■■□□ 2.23
CGREF1-207ENST00000440612 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.97■■■□□ 2.23
CGREF1-207ENST00000440612 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.97■■■□□ 2.23
CGREF1-207ENST00000440612 TTI1O43156 1089 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 TLR5O60602 858 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 GOT1P17174 413 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 EFEMP1Q12805 493 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 PLD1Q13393 1074 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 GPM6BQ13491 265 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 BRMS1LQ5PSV4 323 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 FCRL2Q96LA5 508 aaPredicted RBP28.97■■■□□ 2.23
CGREF1-207ENST00000440612 HINFPQ9BQA5 517 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 IL21Q9HBE4 155 aa28.97■■■□□ 2.23
CGREF1-207ENST00000440612 OLA1Q9NTK5 396 aaKnown RBP28.97■■■□□ 2.23
CGREF1-207ENST00000440612 ZSCAN5CA6NGD5 496 aaPredicted RBP28.96■■■□□ 2.23
CGREF1-207ENST00000440612 LIASO43766 372 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 GLUD1P00367 558 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 C8AP07357 584 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 PECAM1P16284 738 aaPredicted RBP28.96■■■□□ 2.23
CGREF1-207ENST00000440612 NNTQ13423 1086 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 ANKRD7Q92527 254 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 SLCO2A1Q92959 643 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 HAUS1Q96CS2 278 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 ZNF512Q96ME7 567 aaPredicted RBP28.96■■■□□ 2.23
CGREF1-207ENST00000440612 LRRC3Q9BY71 257 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 HOMER3Q9NSC5 361 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 STIM2Q9P246 746 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 SNX10Q9Y5X0 201 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 ZMYND10O75800 440 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 IGLV3-27P01718 113 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 CCR1P32246 355 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 SNX1Q13596 522 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 ARL13BQ3SXY8 428 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 C10orf120Q5SQS8 335 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 DRICH1Q6PGQ1 229 aaPredicted RBP28.96■■■□□ 2.23
CGREF1-207ENST00000440612 SLC35B2Q8TB61 432 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 ACTL9Q8TC94 416 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 MICAL1Q8TDZ2 1067 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 NKX2-4Q9H2Z4 354 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 CERS4Q9HA82 394 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 MARCH2Q9P0N8 246 aa28.96■■■□□ 2.23
CGREF1-207ENST00000440612 APOC4-APOC2K7ER74 178 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 APOC2P02655 101 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 F11P03951 625 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 VSNL1P62760 191 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 DR1Q01658 176 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 DHX34Q14147 1143 aaKnown RBP28.95■■■□□ 2.22
CGREF1-207ENST00000440612 TFDP2Q14188 446 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 WDR93Q6P2C0 686 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 CCDC149Q6ZUS6 474 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 CCDC26Q8TAB7 109 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 OSBPL2Q9H1P3 480 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 DNPEPQ9ULA0 475 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 ASB3Q9Y575 518 aa28.95■■■□□ 2.22
CGREF1-207ENST00000440612 TRANK1O15050 2925 aa28.94■■■□□ 2.22
CGREF1-207ENST00000440612 CLASP2O75122 1294 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms