RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 USP2O75604 605 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 MICAL2O94851 1124 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 ERBB2P04626 1255 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARL2P36404 184 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 NME3Q13232 169 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 PIGHQ14442 188 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 PLEKHA7Q6IQ23 1121 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 TRMT10BQ6PF06 316 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 MPZL3Q6UWV2 235 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 AMIGO2Q86SJ2 522 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 KATNAL2Q8IYT4 538 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 NAT16Q8N8M0 369 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPP4R1Q8TF05 950 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDT1Q9H211 546 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 PNPOQ9NVS9 261 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 CACNG4Q9UBN1 327 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARHGAP26Q9UNA1 814 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 UBR3Q6ZT12 1888 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CNTNAP2Q9UHC6 1331 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 TCRBV9S1A1TA0A576 114 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 A8MXQ7 604 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 STX16-NPEPL1H3BU86 382 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 LRCH4O75427 683 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 AMHP03971 560 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ADCYAP1R1P41586 468 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 DYNC1I2Q13409 638 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 PDK3Q15120 406 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 XRRA1Q6P2D8 792 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 TRIML2Q8N7C3 387 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 SETD4Q9NVD3 440 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 STX18Q9P2W9 335 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZC3H7BQ9UGR2 993 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 MED7O43513 233 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CLPTM1O96005 669 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 GNL1P36915 607 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 HADHBP55084 474 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ROR1Q01973 937 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CAV1Q03135 178 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 GOLGA7BQ2TAP0 167 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ACBD5Q5T8D3 534 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 KDELC2Q7Z4H8 507 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 WDR49Q8IV35 697 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 WDTC1Q8N5D0 677 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 SGF29Q96ES7 293 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMEM109Q9BVC6 243 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 GPRC5DQ9NZD1 345 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CYTH4Q9UIA0 394 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 hCG_1818297A0A087WSY0 165 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 IQANK1A0A1B0GTG1 560 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 KRT7P08729 469 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 GRIA1P42261 906 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 GRIA2P42262 883 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 NUDT2P50583 147 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CSE1LP55060 971 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZNF252P-AS1Q0IIN9 211 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 STX3Q13277 289 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 OASLQ15646 514 aaKnown RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CYP1B1Q16678 543 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPM1JQ5JR12 505 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 LRRC8BQ6P9F7 803 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 DRAXINQ8NBI3 349 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 CHST13Q8NET6 341 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 DEPDC1BQ8WUY9 529 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 SIKE1Q9BRV8 207 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 C20orf27Q9GZN8 174 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 RABGEF1Q9UJ41 708 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 ADAMTS6Q9UKP5 1117 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
CDC42SE1-202ENST00000439374 TAF1LQ8IZX4 1826 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 C15orf38-AP3S2A0A0A6YYH1 394 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ITM2AO43736 263 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MSCO60682 206 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZNF189O75820 626 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 MTA2O94776 668 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 GLRBP48167 497 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 IREB2P48200 963 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDH15P55291 814 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 TTLL4Q14679 1199 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 LBRQ14739 615 aaKnown RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMEM132DQ14C87 1099 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 C16orf72Q14CZ0 275 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 SH2D4BQ5SQS7 431 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARPINQ7Z6K5 226 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM131BQ86XD5 332 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 PHF13Q86YI8 300 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 DENND1AQ8TEH3 1009 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 NAT14Q8WUY8 206 aa10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM136AQ96C01 138 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms