RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 WDCPQ9H6R7 721 aa21.52■■□□□ 1.04
CHD3-204ENST00000439235 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHD3-204ENST00000439235 MRPS23Q9Y3D9 190 aaKnown RBP21.52■■□□□ 1.04
CHD3-204ENST00000439235 FANCGO15287 622 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 KRT1P04264 644 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 MBL2P11226 248 aaPredicted RBP21.51■■□□□ 1.03
CHD3-204ENST00000439235 GJA1P17302 382 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 HDCP19113 662 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 MARCKSL1P49006 195 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 RING1Q06587 406 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 COL19A1Q14993 1142 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 TEAD2Q15562 447 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 SLC5A9Q2M3M2 681 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 EFHC2Q5JST6 749 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 ERMARDQ5T6L9 678 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 GPR158Q5T848 1215 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 CES5AQ6NT32 575 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 PLD4Q96BZ4 506 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 PABPC5Q96DU9 382 aaKnown RBP21.51■■□□□ 1.03
CHD3-204ENST00000439235 TCEAL4Q96EI5 215 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 SLC39A13Q96H72 371 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 RBM41Q96IZ5 413 aaKnown RBP21.51■■□□□ 1.03
CHD3-204ENST00000439235 SNRNP25Q9BV90 132 aaKnown RBP21.51■■□□□ 1.03
CHD3-204ENST00000439235 TASP1Q9H6P5 420 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 AP4E1Q9UPM8 1137 aa21.51■■□□□ 1.03
CHD3-204ENST00000439235 KCNK3O14649 394 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 TBX10O75333 385 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 MOSPD3O75425 235 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 IGLV3-27P01718 113 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CKMP06732 381 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 RARAP10276 462 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 PRLRP16471 622 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 PEX5P50542 639 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 SCAPQ12770 1279 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 SMTNL2Q2TAL5 461 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 NUGGCQ68CJ6 796 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 TXNRD3NBQ6F5E7 133 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 EP400NLQ6ZTU2 488 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CYP4V2Q6ZWL3 525 aaPredicted RBP21.5■■□□□ 1.03
CHD3-204ENST00000439235 CCDC185Q8N715 623 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 ARL14EPQ8N8R7 260 aaPredicted RBP21.5■■□□□ 1.03
CHD3-204ENST00000439235 MAB21L3Q8N8X9 362 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 HSPH1Q92598 858 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 ALG3Q92685 438 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 PBKQ96KB5 322 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 FCRL2Q96LA5 508 aaPredicted RBP21.5■■□□□ 1.03
CHD3-204ENST00000439235 OSBPL9Q96SU4 736 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 APOL5Q9BWW9 433 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 TKTL2Q9H0I9 626 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CARD9Q9H257 536 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 ADAM7Q9H2U9 754 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 ARHGEF38Q9NXL2 777 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CLEC1BQ9P126 229 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 SLC12A6Q9UHW9 1150 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 FZD10Q9ULW2 581 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 SAR1BQ9Y6B6 198 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CHD7Q9P2D1 2997 aa21.5■■□□□ 1.03
CHD3-204ENST00000439235 CES2O00748 559 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 FSHRP23945 695 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 ADRA1BP35368 520 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 CETN2P41208 172 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 SLC7A9P82251 487 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 ZC3H12AQ5D1E8 599 aaKnown RBP21.49■■□□□ 1.03
CHD3-204ENST00000439235 KCNT1Q5JUK3 1230 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 SEL1L2Q5TEA6 688 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 UNC45BQ8IWX7 931 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 ATP6V0D2Q8N8Y2 350 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 EXD1Q8NHP7 514 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 RIPOR3Q96MK2 946 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 PSMB7Q99436 277 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 KLF16Q9BXK1 252 aaPredicted RBP21.49■■□□□ 1.03
CHD3-204ENST00000439235 RNF38Q9H0F5 515 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 SLITRK6Q9H5Y7 841 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHD3-204ENST00000439235 COL6A3P12111 3177 aa21.49■■□□□ 1.03
CHD3-204ENST00000439235 ZRANB2O95218 330 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHD3-204ENST00000439235 HMBSP08397 361 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 CEBPBP17676 345 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 AVPR1AP37288 418 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 AMPD2Q01433 879 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 KRT81Q14533 505 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 PDK2Q15119 407 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 ATAT1Q5SQI0 421 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 STXBP5Q5T5C0 1151 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 DDX42Q86XP3 938 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHD3-204ENST00000439235 MAP7D3Q8IWC1 876 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 RCOR2Q8IZ40 523 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 MYLIPQ8WY64 445 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 CDX2Q99626 313 aaPredicted RBP21.48■■□□□ 1.03
CHD3-204ENST00000439235 SLC46A2Q9BY10 475 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 DHX35Q9H5Z1 703 aaKnown RBP21.48■■□□□ 1.03
CHD3-204ENST00000439235 CPQQ9Y646 472 aa21.48■■□□□ 1.03
CHD3-204ENST00000439235 OBSL1O75147 1896 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 MYO7AQ13402 2215 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 LRRD1A4D1F6 860 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 KCNU1A8MYU2 1149 aa21.47■■□□□ 1.03
CHD3-204ENST00000439235 NRG2O14511 850 aaPredicted RBP21.47■■□□□ 1.03
CHD3-204ENST00000439235 URI1O94763 535 aaPredicted RBP21.47■■□□□ 1.03
CHD3-204ENST00000439235 HARS2P49590 506 aaKnown RBP21.47■■□□□ 1.03
CHD3-204ENST00000439235 CDH6P55285 790 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms