RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PSMC1P62191 440 aaKnown RBP11.79□□□□□ -0.52
CSTF3-203ENST00000438862 NUCB2P80303 420 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 VAC14Q08AM6 782 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 DNAJC3Q13217 504 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 PRICKLE2Q7Z3G6 844 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 LIMS2Q7Z4I7 341 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
CSTF3-203ENST00000438862 LSMEM2Q8N112 164 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 CXorf38Q8TB03 319 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 UCMAQ8WVF2 138 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 TSC1Q92574 1164 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 FBXO32Q969P5 355 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 SKA1Q96BD8 255 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 DPH1Q9BZG8 443 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 THAP10Q9P2Z0 257 aaPredicted RBP11.79□□□□□ -0.52
CSTF3-203ENST00000438862 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
CSTF3-203ENST00000438862 FBXO10Q9UK96 956 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
CSTF3-203ENST00000438862 SLCO1B1Q9Y6L6 691 aa11.79□□□□□ -0.52
CSTF3-203ENST00000438862 USP9XQ93008 2570 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 YKT6O15498 198 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 ITGAVP06756 1048 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 KRT19P08727 400 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 ABCB4P21439 1286 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 RPIAP49247 311 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 COPAP53621 1224 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 CDH8P55286 799 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 C21orf59P57076 290 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 IL9RQ01113 521 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 IFRD2Q12894 506 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 TPGS1Q6ZTW0 290 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 HS2ST1Q7LGA3 356 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 KBTBD7Q8WVZ9 684 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 CDK5RAP3Q96JB5 506 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 ELF4Q99607 663 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 REEP2Q9BRK0 252 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 FAM117AQ9C073 453 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 NACA2Q9H009 215 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 C6orf106Q9H6K1 298 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 SLC27A6Q9Y2P4 619 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
CSTF3-203ENST00000438862 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
CSTF3-203ENST00000438862 H3BQV1 296 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 VILLO15195 856 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 STX6O43752 255 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 TSPAN3O60637 253 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 LDHAP00338 332 aaKnown RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 IRF1P10914 325 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 ACSL1P33121 698 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 IL17AQ16552 155 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 KCNT1Q5JUK3 1230 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 FAM124AQ86V42 546 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 GATAD2AQ86YP4 633 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 DCBLD1Q8N8Z6 715 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 SAP25Q8TEE9 199 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 WBP2Q969T9 261 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 BIRC7Q96CA5 298 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 NAF1Q96HR8 494 aaKnown RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 HIC2Q96JB3 615 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 ACE2Q9BYF1 805 aaPredicted RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 ELOVL4Q9GZR5 314 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 ST6GALNAC4Q9H4F1 302 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 COMMD8Q9NX08 183 aa11.77□□□□□ -0.53
CSTF3-203ENST00000438862 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 UBR5O95071 2799 aaPredicted RBP11.77□□□□□ -0.53
CSTF3-203ENST00000438862 TISP43B9A030 160 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 CBX4O00257 560 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
CSTF3-203ENST00000438862 GREM1O60565 184 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 FAM163BP0C2L3 166 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 CKMT2P17540 419 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 GNL1P36915 607 aaPredicted RBP11.76□□□□□ -0.53
CSTF3-203ENST00000438862 BCAT1P54687 386 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 ERVPABLB-1P60509 514 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 RACK1P63244 317 aaKnown RBP11.76□□□□□ -0.53
CSTF3-203ENST00000438862 E2F1Q01094 437 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 ZNF574Q6ZN55 896 aaPredicted RBP11.76□□□□□ -0.53
CSTF3-203ENST00000438862 BRSK2Q8IWQ3 736 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 EID2Q8N6I1 236 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 HPDLQ96IR7 371 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 PLIN2Q99541 437 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 BTBD1Q9H0C5 482 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 ZSCAN16Q9H4T2 348 aaPredicted RBP11.76□□□□□ -0.53
CSTF3-203ENST00000438862 PRDM9Q9NQV7 894 aa11.76□□□□□ -0.53
CSTF3-203ENST00000438862 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms