RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TOP6BLQ8N6T0 577 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 SH3TC2Q8TF17 1288 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 CLEC4CQ8WTT0 213 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 YIPF3Q9GZM5 350 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 ETNK1Q9HBU6 452 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 PRKAG3Q9UGI9 489 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 TRIM17Q9Y577 477 aa14.4□□□□□ -0.1
PTCHD3-201ENST00000438700 TDRD15B5MCY1 1934 aaKnown RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 NDC80O14777 642 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ZNF623O75123 536 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 AVILO75366 819 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ASMTLO95671 621 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 KRT4P19013 534 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 FAXCQ5TGI0 409 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 IGDCC3Q8IVU1 814 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 CRYBG2Q8N1P7 616 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 PAFAH2Q99487 392 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 PITPNM3Q9BZ71 974 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ARL2BPQ9Y2Y0 163 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 GOLGA8RI6L899 631 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 PAPSS1O43252 624 aaPredicted RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 GABBR2O75899 941 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ENDOD1O94919 500 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 WARSP23381 471 aaKnown RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 SDC4P31431 198 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 PHBP35232 272 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 CCDC33Q8N5R6 958 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 RNF157Q96PX1 679 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 KLF6Q99612 283 aaPredicted RBP14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 RXFP1Q9HBX9 757 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 SLCO1B3Q9NPD5 702 aa14.39□□□□□ -0.11
PTCHD3-201ENST00000438700 KCNN4O15554 427 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 POMCP01189 267 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 LINGO3P0C6S8 592 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 GM2AP17900 193 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 IL4RP24394 825 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 ELK3P41970 407 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 PRMT2P55345 433 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 MBTPS1Q14703 1052 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 PLD5Q8N7P1 536 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 C3orf58Q8NDZ4 430 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC35F5Q8WV83 523 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SENP8Q96LD8 212 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SNRNP25Q9BV90 132 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 MAGEB5Q9BZ81 275 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 BATF3Q9NR55 127 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC24A2Q9UI40 661 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 PRPF4O43172 522 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 MAP3K13O43283 966 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 MYCP01106 439 aaPredicted RBP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SETSIPP0DME0 302 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 ACAT1P24752 427 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC6A3Q01959 620 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 TFDP2Q14188 446 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 MTFR1Q15390 333 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 ARMC2Q8NEN0 867 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC2A14Q8TDB8 520 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 DENND1AQ8TEH3 1009 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 TNIP3Q96KP6 325 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 C12orf65Q9H3J6 166 aaKnown RBP14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 ACSS3Q9H6R3 686 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 RAB6BQ9NRW1 208 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 SAGE1Q9NXZ1 904 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
PTCHD3-201ENST00000438700 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 E7ESA3 106 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 TARSP26639 723 aaKnown RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 TKTP29401 623 aaKnown RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 STIP1P31948 543 aaKnown RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 BCAR1P56945 870 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 SPARCL1Q14515 664 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 TAF11Q15544 211 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 THEMIS2Q5TEJ8 643 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 PQLC3Q8N755 202 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 ANKRD52Q8NB46 1076 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 B3GALNT2Q8NCR0 500 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 PCDH18Q9HCL0 1135 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 PHF24Q9UPV7 400 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 SQORQ9Y6N5 450 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 APOL1O14791 398 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 LCP1P13796 627 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 RBL1P28749 1068 aa14.37□□□□□ -0.11
PTCHD3-201ENST00000438700 TUBP50607 506 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms