RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 CTDNEP1O95476 244 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ITGB2P05107 769 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 CENPBP07199 599 aaPredicted RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 PDGFRBP09619 1106 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 YWHAQP27348 245 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 CD38P28907 300 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 RBMS1P29558 406 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 PNPLA4P41247 253 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 LHX1P48742 406 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF132P52740 706 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 RPS14P62263 151 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 CLCA4Q14CN2 919 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF174Q15697 407 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 SOWAHAQ2M3V2 549 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 TMC6Q7Z403 805 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 SPATS2Q86XZ4 545 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 RBBP8NLQ8NC74 664 aaPredicted RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF274Q96GC6 653 aaPredicted RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 ATXN7L3BQ96GX2 97 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 CIPCQ9C0C6 399 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF518BQ9C0D4 1074 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 NACA2Q9H009 215 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 OSBPL2Q9H1P3 480 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ZNF768Q9H5H4 540 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 SERGEFQ9UGK8 458 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
RPE-210ENST00000438204 CLEC4EQ9ULY5 219 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 NME7Q9Y5B8 376 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 SCN8AQ9UQD0 1980 aa9.64□□□□□ -0.87
RPE-210ENST00000438204 CLDN5O00501 218 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 MDM4O15151 490 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 FFAR2O15552 330 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 RTN2O75298 545 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CDKL5O76039 1030 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 TBX18O95935 607 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 NXPH1P58417 271 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CYP4F2P78329 520 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
RPE-210ENST00000438204 KCNJ12Q14500 433 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 TGIF1Q15583 401 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 TBR1Q16650 682 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 ISXQ2M1V0 245 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 TMEM215Q68D42 235 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 IGF2-ASQ6U949 168 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CRELD2Q6UXH1 353 aaPredicted RBP9.63□□□□□ -0.87
RPE-210ENST00000438204 HTR3DQ70Z44 454 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 ANKS1BQ7Z6G8 1248 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 SKAP1Q86WV1 359 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 TOP6BLQ8N6T0 577 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 SCAMP5Q8TAC9 235 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 ZNF564Q8TBZ8 553 aaPredicted RBP9.63□□□□□ -0.87
RPE-210ENST00000438204 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 UCMAQ8WVF2 138 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CCDC97Q96F63 343 aaPredicted RBP9.63□□□□□ -0.87
RPE-210ENST00000438204 C8orf48Q96LL4 319 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CEP295NLQ96MC4 621 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 SEMA3CQ99985 751 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 SLC25A18Q9H1K4 315 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 FBXO10Q9UK96 956 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 PLAAQ9Y263 795 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 CELSR2Q9HCU4 2923 aa9.63□□□□□ -0.87
RPE-210ENST00000438204 NPC1O15118 1278 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 TLR5O60602 858 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 KRT19P08727 400 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 RNF224P0DH78 156 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 FDPSP14324 419 aaKnown RBP9.62□□□□□ -0.87
RPE-210ENST00000438204 RXRGP48443 463 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 ZRSR1Q15695 479 aaKnown RBP9.62□□□□□ -0.87
RPE-210ENST00000438204 FNDC3BQ53EP0 1204 aaKnown RBP9.62□□□□□ -0.87
RPE-210ENST00000438204 FYB2Q5VWT5 728 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 ADALQ6DHV7 355 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 XKR5Q6UX68 686 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 RUFY3Q7L099 469 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 ZSWIM2Q8NEG5 633 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 PDZD8Q8NEN9 1154 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 HTR3CQ8WXA8 447 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 SKA1Q96BD8 255 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 PIWIL1Q96J94 861 aaKnown RBP9.62□□□□□ -0.87
RPE-210ENST00000438204 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
RPE-210ENST00000438204 SGK2Q9HBY8 427 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.874e-6■■■■■ 111.8
RPE-210ENST00000438204 ELOVL2Q9NXB9 296 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 TJP2Q9UDY2 1190 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 SIX4Q9UIU6 781 aa9.62□□□□□ -0.87
RPE-210ENST00000438204 SDK2Q58EX2 2172 aa9.61□□□□□ -0.87
RPE-210ENST00000438204 LY6G6EA0A0G2JKS1 128 aa9.61□□□□□ -0.87
RPE-210ENST00000438204 A1L4Q6 167 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms