RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IBSPP21815 317 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-216ENST00000437340 AMPD1P23109 780 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 GPX6P59796 221 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 FAM189BP81408 668 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 SCAPQ12770 1279 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 PAN2Q504Q3 1202 aaKnown RBP26.62■■□□□ 1.85
CPNE1-216ENST00000437340 EFHC2Q5JST6 749 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 OVOS1Q6IE37 1185 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 B4GALNT4Q76KP1 1039 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 RTN4RL1Q86UN2 441 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-216ENST00000437340 SPATS2Q86XZ4 545 aaKnown RBP26.62■■□□□ 1.85
CPNE1-216ENST00000437340 PYROXD2Q8N2H3 581 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 RNF139Q8WU17 664 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 MAML1Q92585 1016 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 OLFM3Q96PB7 478 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 DMAP1Q9NPF5 467 aaPredicted RBP26.62■■□□□ 1.85
CPNE1-216ENST00000437340 ARHGEF4Q9NR80 690 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 DTLQ9NZJ0 730 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 CLUHO75153 1309 aa26.62■■□□□ 1.85
CPNE1-216ENST00000437340 USP17L7P0C7H9 530 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 GCAP28676 217 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 CDK7P50613 346 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 HP1BP3Q5SSJ5 553 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-216ENST00000437340 PM20D1Q6GTS8 502 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 ANKMY2Q8IV38 441 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 CYP4X1Q8N118 509 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 PIGVQ9NUD9 493 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 C5orf60A6NFR6 353 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 F9P00740 461 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 ATP2A2P16615 1042 aaKnown RBP26.61■■□□□ 1.85
CPNE1-216ENST00000437340 TSPY1Q01534 308 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 NME3Q13232 169 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 MBTPS1Q14703 1052 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 KCNT2Q6UVM3 1135 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 VSTM1Q6UX27 236 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 TAB3Q8N5C8 712 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-216ENST00000437340 FBXO36Q8NEA4 188 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 SLC7A14Q8TBB6 771 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 CRISPLD2Q9H0B8 497 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 ETNK2Q9NVF9 386 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 PCDHB8Q9UN66 801 aa26.61■■□□□ 1.85
CPNE1-216ENST00000437340 DGKIO75912 1065 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 ADRA1BP35368 520 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 MNX1P50219 401 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-216ENST00000437340 BBS9Q3SYG4 887 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 BHLHA9Q7RTU4 235 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 PALM2Q8IXS6 379 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 WDR83Q9BRX9 315 aaKnown RBP26.6■■□□□ 1.85
CPNE1-216ENST00000437340 TRIM62Q9BVG3 475 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 FTHL17Q9BXU8 183 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 SEZ6LQ9BYH1 1024 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 WDR6Q9NNW5 1121 aaKnown RBP26.6■■□□□ 1.85
CPNE1-216ENST00000437340 TBK1Q9UHD2 729 aa26.6■■□□□ 1.85
CPNE1-216ENST00000437340 TMEM189-UBE2V1I3L0A0 370 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 BANF1O75531 89 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 ZNF189O75820 626 aaPredicted RBP26.59■■□□□ 1.85
CPNE1-216ENST00000437340 NCAM1P13591 858 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 BDNFP23560 247 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 DSC1Q08554 894 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 BEND5Q7L4P6 421 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 MCUQ8NE86 351 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 OR10T2Q8NGX3 314 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 HASPINQ8TF76 798 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 ARMC5Q96C12 935 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 CHMP6Q96FZ7 201 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 SENP1Q9P0U3 644 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 KANSL3Q9P2N6 904 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 RABGEF1Q9UJ41 708 aa26.59■■□□□ 1.85
CPNE1-216ENST00000437340 SYNJ2BP-COX16A0A087WUM0 186 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 TMEM120BA0PK00 339 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 SPAG6O75602 509 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 MAP3K6O95382 1288 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 BRAFP15056 766 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 ZNF135P52742 658 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-216ENST00000437340 RABGGTBP53611 331 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 PPARDQ03181 441 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 KLHL38Q2WGJ6 581 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 HEATR6Q6AI08 1181 aaKnown RBP26.58■■□□□ 1.85
CPNE1-216ENST00000437340 C3orf62Q6ZUJ4 267 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 FAM126BQ8IXS8 530 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 VPS52Q8N1B4 723 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 URGCPQ8TCY9 931 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 TFB1MQ8WVM0 346 aaKnown RBP26.58■■□□□ 1.85
CPNE1-216ENST00000437340 ACSS3Q9H6R3 686 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 COX16Q9P0S2 106 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 GGA2Q9UJY4 613 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 FBXW11Q9UKB1 542 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 ITGB1P05556 798 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 COL6A1P12109 1028 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 HCAR3P49019 387 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 GEMIN4P57678 1058 aaKnown RBP26.58■■□□□ 1.85
CPNE1-216ENST00000437340 TMED2Q15363 201 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 ARL13BQ3SXY8 428 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 NOMO2Q5JPE7 1267 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 LINC01599Q8WXQ3 324 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 TMLHEQ9NVH6 421 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 PSMC3IPQ9P2W1 217 aaPredicted RBP26.58■■□□□ 1.85
CPNE1-216ENST00000437340 TEX264Q9Y6I9 313 aa26.58■■□□□ 1.85
CPNE1-216ENST00000437340 RASA4BC9J798 803 aa26.57■■□□□ 1.84
CPNE1-216ENST00000437340 POC1B-GALNT4F8VUJ3 575 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms