RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ACOX2Q99424 681 aa19.1■□□□□ 0.65
HMGN1-207ENST00000436324 SLC4A5Q9BY07 1137 aa19.1■□□□□ 0.65
HMGN1-207ENST00000436324 POLMQ9NP87 494 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-207ENST00000436324 BCCIPQ9P287 314 aaKnown RBP eCLIP19.1■□□□□ 0.65
HMGN1-207ENST00000436324 CLEC4EQ9ULY5 219 aa19.1■□□□□ 0.65
HMGN1-207ENST00000436324 NAALADL1Q9UQQ1 740 aa19.1■□□□□ 0.65
HMGN1-207ENST00000436324 VPS13AQ96RL7 3174 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 TCRBV21S2A2A0A5A6 115 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 E5RJQ4 531 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 FOXN3O00409 490 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-207ENST00000436324 NTSR1P30989 418 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 GBP1P32455 592 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 TBX4P57082 545 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 PTK2Q05397 1052 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 KCNMA1Q12791 1236 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 CCDC6Q16204 474 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 USP39Q53GS9 565 aaKnown RBP19.09■□□□□ 0.65
HMGN1-207ENST00000436324 SASS6Q6UVJ0 657 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 RASSF3Q86WH2 238 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 CHPFQ8IZ52 775 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 GPR161Q8N6U8 529 aaKnown RBP19.09■□□□□ 0.65
HMGN1-207ENST00000436324 ENOX1Q8TC92 643 aaKnown RBP19.09■□□□□ 0.65
HMGN1-207ENST00000436324 RMDN1Q96DB5 314 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 LSM14BQ9BX40 385 aaKnown RBP19.09■□□□□ 0.65
HMGN1-207ENST00000436324 ARRDC1-AS1Q9H2J1 176 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 TJP2Q9UDY2 1190 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 FBXO10Q9UK96 956 aa19.09■□□□□ 0.65
HMGN1-207ENST00000436324 PAPSS1O43252 624 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 FYNP06241 537 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 HOXB2P14652 356 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 RPL34P49207 117 aaKnown RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 RAPGEF1Q13905 1077 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 PLK5Q496M5 336 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 SDE2Q6IQ49 451 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 DPY19L2P1Q6NXN4 242 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 RBM43Q6ZSC3 357 aaKnown RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 C11orf57Q6ZUT1 292 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 FAM217AQ8IXS0 508 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 ADAM32Q8TC27 787 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 KCNV2Q8TDN2 545 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 DQX1Q8TE96 717 aaKnown RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 STK32AQ8WU08 396 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 RLN3Q8WXF3 142 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 VPS16Q9H269 839 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 SEMA4GQ9NTN9 838 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 CACNA2D2Q9NY47 1150 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 STARD13Q9Y3M8 1113 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 FHOD1Q9Y613 1164 aa19.08■□□□□ 0.64
HMGN1-207ENST00000436324 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.08■□□□□ 0.64
HMGN1-207ENST00000436324 GOLGA6L7A0A1B0GV03 622 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 CAPN9O14815 690 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 SART1O43290 800 aaKnown RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 EEF1GP26641 437 aaKnown RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 CLCN1P35523 988 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 PDCLQ13371 301 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 DRAP1Q14919 205 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 MEA1Q16626 185 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 GEN1Q17RS7 908 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 RSPO4Q2I0M5 234 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 MPPE1Q53F39 396 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 ADGRF1Q5T601 910 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 KLHDC7AQ5VTJ3 777 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 SYPL2Q5VXT5 272 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 TMEM110Q86TL2 294 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 SLC47A2Q86VL8 602 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 WDTC1Q8N5D0 677 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 TMA16Q96EY4 203 aaKnown RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 DUSP15Q9H1R2 295 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-207ENST00000436324 PLCB1Q9NQ66 1216 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 RAD54BQ9Y620 910 aa19.07■□□□□ 0.64
HMGN1-207ENST00000436324 FAM170AA1A519 330 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 WASH3PC4AMC7 463 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 BCKDHBP21953 392 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 KRT9P35527 623 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 SGSHP51688 502 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 TAF5Q15542 800 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 ELF2Q15723 593 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 RFWD3Q6PCD5 774 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 UNC45BQ8IWX7 931 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 C1orf131Q8NDD1 294 aaKnown RBP19.06■□□□□ 0.64
HMGN1-207ENST00000436324 ZC3H10Q96K80 434 aaKnown RBP19.06■□□□□ 0.64
HMGN1-207ENST00000436324 PPP1R13BQ96KQ4 1090 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 CPXM1Q96SM3 734 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 ANO10Q9NW15 660 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 FANCLQ9NW38 375 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 SLC27A6Q9Y2P4 619 aa19.06■□□□□ 0.64
HMGN1-207ENST00000436324 ACSL4O60488 711 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 LRP3O75074 770 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 RHOBTB1O94844 696 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 EPN2O95208 641 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 LATS1O95835 1130 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 IGLV3-27P01718 113 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 HOXD9P28356 352 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-207ENST00000436324 SLC11A2P49281 568 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 KRT31Q15323 416 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 CCDC183Q5T5S1 534 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 NUGGCQ68CJ6 796 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 OR6B2Q6IFH4 312 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 KIAA1211LQ6NV74 962 aa19.05■□□□□ 0.64
HMGN1-207ENST00000436324 ANKS1BQ7Z6G8 1248 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms