RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NFYCQ13952 458 aa11.49□□□□□ -0.57
SCN4A-201ENST00000435607 LRRC49Q8IUZ0 686 aa11.49□□□□□ -0.57
SCN4A-201ENST00000435607 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
SCN4A-201ENST00000435607 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
SCN4A-201ENST00000435607 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
SCN4A-201ENST00000435607 TRAV19A0A0A6YYK7 116 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 PSTPIP1O43586 416 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 ZBTB14O43829 449 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MAGEA4P43358 317 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 BCL2L1Q07817 233 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TINF2Q9BSI4 451 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 RSPH9Q9H1X1 276 aaPredicted RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MANSC1Q9H8J5 431 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 AASDHPPTQ9NRN7 309 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 RAMP2O60895 175 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 OR6B1O95007 311 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 PARNO95453 639 aaKnown RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 THRAP10827 490 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TRIP10Q15642 601 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MROH9Q5TGP6 573 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 OVOS1Q6IE37 1185 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 FAM71DQ8N9W8 422 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TBX4P57082 545 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 ZMYND11Q15326 602 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 NR6A1Q15406 480 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 LONP2Q86WA8 852 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 FAR1Q8WVX9 515 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TBX20Q9UMR3 447 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 PBRM1Q86U86 1689 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 H3BNH8 94 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 DGKIO75912 1065 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 LBPP18428 481 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 IL1RAPL1Q9NZN1 696 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MCM8Q9UJA3 840 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MRTO4Q9UKD2 239 aaKnown RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 RPTORQ8N122 1335 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 NCK2O43639 380 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 SGTAO43765 313 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 CUL2Q13617 745 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 PDZK1Q5T2W1 519 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 MARC1Q5VT66 337 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 CDC42EP5Q6NZY7 148 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 BHLHB9Q6PI77 547 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 PDCD10Q9BUL8 212 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 E2F8A0AVK6 867 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 VPS72Q15906 364 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 DGKKQ5KSL6 1271 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 FAM171A1Q5VUB5 890 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 SLC9A7Q96T83 725 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 C7orf25Q9BPX7 421 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 ELOVL2Q9NXB9 296 aa11.48□□□□□ -0.57
SCN4A-201ENST00000435607 USP15Q9Y4E8 981 aaPredicted RBP11.48□□□□□ -0.57
SCN4A-201ENST00000435607 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
SCN4A-201ENST00000435607 CABYRO75952 493 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ICAM1P05362 532 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 CBWD1Q9BRT8 395 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 KLHL1Q9NR64 748 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 CCNB2O95067 398 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 OR1E1P30953 314 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 STAT5AP42229 794 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TMED10P49755 219 aaKnown RBP11.47□□□□□ -0.57
SCN4A-201ENST00000435607 GALCP54803 685 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 KLC1Q07866 573 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 LRRC36Q1X8D7 754 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ZFP28Q8NHY6 868 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 OR8H2Q8N162 312 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 CYP3A43Q9HB55 503 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 AKR1A1P14550 325 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 IGFALSP35858 605 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 FAM46CQ5VWP2 391 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ACOX2Q99424 681 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 DNAJC11Q9NVH1 559 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SSU72P8A0A1W2PR75 194 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 NDUFV1P49821 464 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 PLIN5Q00G26 463 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 SEL1L3Q68CR1 1132 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 C16orf86Q6ZW13 317 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ACOT1Q86TX2 421 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 OR52L1Q8NGH7 329 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 NEK7Q8TDX7 302 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 ADPRHL2Q9NX46 363 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 NCKIPSDQ9NZQ3 722 aa11.47□□□□□ -0.57
SCN4A-201ENST00000435607 GTPBP1O00178 669 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms