RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 BUB1O43683 1085 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 GSTT2P0CG29 244 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 GSTT2BP0CG30 244 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 COL6A2P12110 1019 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 BMP2P12643 396 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 NPR1P16066 1061 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 IL11P20809 199 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 EPHB2P29323 1055 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CDK7P50613 346 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 MECOMQ03112 1051 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 SPAG1Q07617 926 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CUL1Q13616 776 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 UBE3CQ15386 1083 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CFAP157Q5JU67 520 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 KLC3Q6P597 504 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CNKSR3Q6P9H4 555 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CRTC3Q6UUV7 619 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 MARK2Q7KZI7 788 aaKnown RBP6.4□□□□□ -1.39
VRK2-206ENST00000435505 ZNF765Q7L2R6 523 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 RTKN2Q8IZC4 609 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 ANKRD13CQ8N6S4 541 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 KCTD6Q8NC69 237 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 TBC1D16Q8TBP0 767 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 SPPL3Q8TCT6 385 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 LPIN2Q92539 896 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 CNDP2Q96KP4 475 aaKnown RBP6.4□□□□□ -1.39
VRK2-206ENST00000435505 INPP4AQ96PE3 977 aaPredicted RBP6.4□□□□□ -1.39
VRK2-206ENST00000435505 SMC6Q96SB8 1091 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 COLEC11Q9BWP8 271 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 DENND2DQ9H6A0 471 aaPredicted RBP6.4□□□□□ -1.39
VRK2-206ENST00000435505 AZI2Q9H6S1 392 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 TRPV4Q9HBA0 871 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 TBC1D30Q9Y2I9 924 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 N6AMT1Q9Y5N5 214 aa6.4□□□□□ -1.39
VRK2-206ENST00000435505 PDS5AQ29RF7 1337 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 MYH4Q9Y623 1939 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TCP11X1B4DZS4 312 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 FTCDO95954 541 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
VRK2-206ENST00000435505 ABCD3P28288 659 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 LGALS4P56470 323 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TNNC1P63316 161 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 CYP4A11Q02928 519 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 UBE3AQ05086 875 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 EIF4A2Q14240 407 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 RCN1Q15293 331 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 SPA17Q15506 151 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 CCDC6Q16204 474 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 WDR72Q3MJ13 1102 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 C1orf141Q5JVX7 400 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 GRAMD4Q6IC98 578 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 CGB2Q6NT52 195 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 UNQ6494/PRO21346Q6UXR6 183 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 ZNF783Q6ZMS7 281 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 LRRC74BQ6ZQY2 392 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 FAM133AQ8N9E0 248 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 CHST13Q8NET6 341 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 CEP70Q8NHQ1 597 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 DNAJB8Q8NHS0 232 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 NMD3Q96D46 503 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 LPIN3Q9BQK8 851 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 MIS12Q9H081 205 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TAOK3Q9H2K8 898 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TXLNGQ9NUQ3 528 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 STOML1Q9UBI4 398 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 DDX25Q9UHL0 483 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 PACSIN2Q9UNF0 486 aaPredicted RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 ARL2BPQ9Y2Y0 163 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 DYRK1BQ9Y463 629 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 PIAS3Q9Y6X2 628 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 NPATQ14207 1427 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 A0A1W2PQC6 194 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 GRID2IPA4D2P6 1211 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 KRBA1A5PL33 1030 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 PHGDHO43175 533 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 KRT36O76013 467 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 OR6B1O95007 311 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 USP11P51784 963 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 SH3BGRP55822 239 aaPredicted RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 SLC12A1Q13621 1099 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 MCMDC2Q4G0Z9 681 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 WASHC2DQ5SRD0 308 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 RFWD3Q6PCD5 774 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 R3HCC1LQ7Z5L2 792 aaKnown RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 IRF2BP1Q8IU81 584 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 SP8Q8IXZ3 490 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.39
VRK2-206ENST00000435505 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 ZNF507Q8TCN5 953 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.39□□□□□ -1.39
VRK2-206ENST00000435505 PAGE5Q96GU1 130 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 SNX27Q96L92 541 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 OLFM3Q96PB7 478 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 TCHPQ9BT92 498 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 POLR3CQ9BUI4 534 aaPredicted RBP6.39□□□□□ -1.39
VRK2-206ENST00000435505 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 PRDM13Q9H4Q3 707 aa6.39□□□□□ -1.39
VRK2-206ENST00000435505 GPATCH2Q9NW75 528 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms