RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 CPQQ9Y646 472 aa17.29■□□□□ 0.36
CCDC13-202ENST00000435327 SOBPA7XYQ1 873 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 APOEP02649 317 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 IRF1P10914 325 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 AVPR1AP37288 418 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 CXCR3P49682 368 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 DNA2P51530 1060 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 KPNA1P52294 538 aaPredicted RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 ETF1P62495 437 aaKnown RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 COG7P83436 770 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 ZC3H12AQ5D1E8 599 aaKnown RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 ZFYVE27Q5T4F4 411 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 MEI1Q5TIA1 1274 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 RHOT1Q8IXI2 618 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 CMTM8Q8IZV2 173 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 FCRL2Q96LA5 508 aaPredicted RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 WDR24Q96S15 920 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 PEBP4Q96S96 227 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 KLF16Q9BXK1 252 aaPredicted RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 WDCPQ9H6R7 721 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 TMEM51Q9NW97 253 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 DNAI1Q9UI46 699 aa17.28■□□□□ 0.36
CCDC13-202ENST00000435327 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
CCDC13-202ENST00000435327 TRANK1O15050 2925 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 MIF4GDA9UHW6 222 aaKnown RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 ENC1O14682 589 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 PSTPIP1O43586 416 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 MOCS2O96007 188 aaPredicted RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 KCNA5P22460 613 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CTNNA2P26232 953 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 IL1R2P27930 398 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CCR1P32246 355 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SLC7A9P82251 487 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 EIF4EBP2Q13542 120 aaPredicted RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 PPP2R5DQ14738 602 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CBX2Q14781 532 aaPredicted RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SMTNL2Q2TAL5 461 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 ARL13BQ3SXY8 428 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 BRMS1LQ5PSV4 323 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 TXNRD3NBQ6F5E7 133 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SYT10Q6XYQ8 523 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 NPAS3Q8IXF0 933 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CCDC185Q8N715 623 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 TTC16Q8NEE8 873 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CD101Q93033 1021 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 PLD4Q96BZ4 506 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SLC39A13Q96H72 371 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SNRNP25Q9BV90 132 aaKnown RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 TKTL2Q9H0I9 626 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SMG9Q9H0W8 520 aaKnown RBP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 GKN1Q9NS71 199 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCDC13-202ENST00000435327 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.36
CCDC13-202ENST00000435327 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 KIF2AO00139 706 aaPredicted RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 ZNF500O60304 480 aaPredicted RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 IGLV3-27P01718 113 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 KRT7P08729 469 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 SLC2A3P11169 496 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 CASQ1P31415 396 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 MARCKSL1P49006 195 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 KCNQ1P51787 676 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 RING1Q06587 406 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 RPS6KA1Q15418 735 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 UBL4BQ8N7F7 174 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 ATP6V0D2Q8N8Y2 350 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 HSPH1Q92598 858 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 KRT35Q92764 455 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 FGF13Q92913 245 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 NTAN1Q96AB6 310 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 ZSWIM3Q96MP5 696 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 NECTIN4Q96NY8 510 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 NAPGQ99747 312 aaPredicted RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 POMKQ9H5K3 350 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 TMPRSS4Q9NRS4 437 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 FZD10Q9ULW2 581 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 AP4E1Q9UPM8 1137 aa17.26■□□□□ 0.35
CCDC13-202ENST00000435327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 USP15Q9Y4E8 981 aaPredicted RBP17.26■□□□□ 0.35
CCDC13-202ENST00000435327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.25■□□□□ 0.35
CCDC13-202ENST00000435327 DDX3YO15523 660 aaKnown RBP17.25■□□□□ 0.35
CCDC13-202ENST00000435327 STC2O76061 302 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 KRT1P04264 644 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
CCDC13-202ENST00000435327 RARAP10276 462 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 GBP2P32456 591 aaPredicted RBP17.25■□□□□ 0.35
CCDC13-202ENST00000435327 ADRA1BP35368 520 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 AIF1P55008 147 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 ATP13A4Q4VNC1 1196 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 BOLA3Q53S33 107 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 ODF2Q5BJF6 829 aa17.25■□□□□ 0.35
CCDC13-202ENST00000435327 EFHC2Q5JST6 749 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms