RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 C10orf88Q9H8K7 445 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 SSU72Q9NP77 194 aaKnown RBP12.38□□□□□ -0.43
CTCFL-209ENST00000433949 GIT1Q9Y2X7 761 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 HEY1Q9Y5J3 304 aa12.38□□□□□ -0.43
CTCFL-209ENST00000433949 FBXO21O94952 628 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 PAX3P23760 479 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 NOS2P35228 1153 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ARL4AP40617 200 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 MAGEA6P43360 314 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 GATMP50440 423 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 GPX6P59796 221 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 YWHAZP63104 245 aaKnown RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 IL9RQ01113 521 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 LRRC34Q8IZ02 419 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 FBXO36Q8NEA4 188 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 VWCEQ96DN2 955 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 PLCD4Q9BRC7 762 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 FTHL17Q9BXU8 183 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ACTR5Q9H9F9 607 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 LRRC4Q9HBW1 653 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 MYO18AQ92614 2054 aaKnown RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CLUHO75153 1309 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 TRIM66O15016 1216 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 HCRTO43612 131 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CREB1P16220 341 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 RAB27AP51159 221 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 AIF1P55008 147 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ADIGQ0VDE8 80 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CA9Q16790 459 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 MRPL10Q7Z7H8 261 aaKnown RBP12.37□□□□□ -0.43
CTCFL-209ENST00000433949 TAX1BP1Q86VP1 789 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 DPF3Q92784 378 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 BADQ92934 168 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 PGBD4Q96DM1 585 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 CYTH2Q99418 400 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 LPIN3Q9BQK8 851 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 FERMT1Q9BQL6 677 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 PCDHB7Q9Y5E2 793 aa12.37□□□□□ -0.43
CTCFL-209ENST00000433949 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 HACD1B0YJ81 288 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 ZNF623O75123 536 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 FSBPO95073 299 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 CPP00450 1065 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 RBL1P28749 1068 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 TKTP29401 623 aaKnown RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 GBP2P32456 591 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 MSS51Q4VC12 460 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 PAN2Q504Q3 1202 aaKnown RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 MGARPQ8TDB4 240 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 ALKBH8Q96BT7 664 aaKnown RBP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 GRAMD1AQ96CP6 724 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 SENP8Q96LD8 212 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 TRABDQ9H4I3 376 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 CEP290O15078 2479 aa12.36□□□□□ -0.43
CTCFL-209ENST00000433949 SF3B1O75533 1304 aaKnown RBP eCLIP12.36□□□□□ -0.43
CTCFL-209ENST00000433949 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 GCATO75600 419 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CXCL10P02778 98 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 SSTR1P30872 391 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 SULT1E1P49888 294 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 IKBKEQ14164 716 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 LRRC14Q15048 493 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 ZNF598Q86UK7 904 aaKnown RBP12.35□□□□□ -0.43
CTCFL-209ENST00000433949 DEFB106AQ8N104 65 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 MCUQ8NE86 351 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 CSPG4P5Q96PW8 444 aa12.35□□□□□ -0.43
CTCFL-209ENST00000433949 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms