RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ENO1P06733 434 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 SETSIPP0DME0 302 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 AMPD1P23109 780 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 ADORA2BP29275 332 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 AQP5P55064 265 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 BLMHQ13867 455 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 CCDC6Q16204 474 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 MAMDC4Q6UXC1 1216 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 RFX8Q6ZV50 586 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 NT5DC4Q86YG4 428 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 TRIM42Q8IWZ5 723 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 FBXO27Q8NI29 283 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 C16orf70Q9BSU1 422 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 FAM124BQ9H5Z6 455 aaPredicted RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 DTLQ9NZJ0 730 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 WDR27A2RRH5 827 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 B2RBV5 119 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 H3BRB1 525 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 H3BRJ5 948 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 KIF1CO43896 1103 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 SMNDC1O75940 238 aaKnown RBP eCLIP12.2□□□□□ -0.46
CD44-209ENST00000433892 BPGMP07738 259 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 GSTA2P09210 222 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 CYP2C8P10632 490 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 GOT1P17174 413 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 TPSB2P20231 275 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 ADORA2AP29274 412 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 CRHR1P34998 444 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 RCN2Q14257 317 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 TPSAB1Q15661 275 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 C4orf22Q6V702 233 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 CRLF3Q8IUI8 442 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 PPTC7Q8NI37 304 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 QKIQ96PU8 341 aaKnown RBP eCLIP12.2□□□□□ -0.46
CD44-209ENST00000433892 LGMNQ99538 433 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 TUT1Q9H6E5 874 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 STOML1Q9UBI4 398 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.2□□□□□ -0.46
CD44-209ENST00000433892 CAPN14A8MX76 684 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 VAV1P15498 845 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
CD44-209ENST00000433892 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 PGM1P36871 562 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 PTPN9P43378 593 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 NR2C2P49116 596 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 SNX16P57768 344 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 KDSRQ06136 332 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 SEMA5AQ13591 1074 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 MUM1Q2TAK8 710 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 NBPF20Q3BBV1 942 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 MARCH8Q5T0T0 291 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 NCBP2-AS2Q69YL0 99 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 C16orf46Q6P387 395 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 ZDHHC17Q8IUH5 632 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 SMC1BQ8NDV3 1235 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 CENPIQ92674 756 aaPredicted RBP12.19□□□□□ -0.46
CD44-209ENST00000433892 APBB2Q92870 758 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 CEP41Q9BYV8 373 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 XAB2Q9HCS7 855 aaKnown RBP12.19□□□□□ -0.46
CD44-209ENST00000433892 MOCS1Q9NZB8 636 aa12.19□□□□□ -0.46
CD44-209ENST00000433892 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
CD44-209ENST00000433892 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 ZNF487B1APH4 448 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 CAPN9O14815 690 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 SNNO75324 88 aaPredicted RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 UPP2O95045 317 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 PDHA1P08559 390 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 LMO2P25791 158 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 HOXA11P31270 313 aaPredicted RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 GRIK4Q16099 956 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 BSPRYQ5W0U4 402 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 ANO7Q6IWH7 933 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 SLC26A9Q7LBE3 791 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 FAM131BQ86XD5 332 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 PPP1R13LQ8WUF5 828 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 TFB1MQ8WVM0 346 aaKnown RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 NRG4Q8WWG1 115 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 HTR3CQ8WXA8 447 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 NDRG1Q92597 394 aaKnown RBP12.18□□□□□ -0.46
CD44-209ENST00000433892 RILPQ96NA2 401 aa12.18□□□□□ -0.46
CD44-209ENST00000433892 OSBPL1AQ9BXW6 950 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms