RNA–Protein interactions for RNA: ENST00000433669.1

LINC00954-201, long intergenic non-protein coding RNA 954, humanhuman

TSL 2 BASIC

Gene LINC00954, Length 2,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-201ENST00000433669 XRCC4Q13426 336 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 OTUD1Q5VV17 481 aaPredicted RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 KLHDC9Q8NEP7 349 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 TFB1MQ8WVM0 346 aaKnown RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 NT5C3BQ969T7 300 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 ARHGEF4Q9NR80 690 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 TEX264Q9Y6I9 313 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 AOC2O75106 756 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 ZNF623O75123 536 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 FYNP06241 537 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 CA4P22748 312 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 BDNFP23560 247 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 MAGEA9P43362 315 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 DAOAP59103 153 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 IL9RQ01113 521 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 SP3Q02447 781 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 AP1B1Q10567 949 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 EDEM1Q92611 657 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 SLC2A13Q96QE2 648 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 CYTH2Q99418 400 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 SENP1Q9P0U3 644 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.64□□□□□ -0.39
LINC00954-201ENST00000433669 USP3Q9Y6I4 520 aa12.64□□□□□ -0.39
LINC00954-201ENST00000433669 TCRBV9S1A1TA0A576 114 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 H3BRJ5 948 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 MFSD11O43934 449 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 GCATO75600 419 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 KBTBD12Q3ZCT8 623 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 CCSAPQ6IQ19 270 aaPredicted RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 ADGRD1Q6QNK2 874 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 AGGF1Q8N302 714 aaeCLIP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 HTR3CQ8WXA8 447 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 PGBD4Q96DM1 585 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 SEPT10Q9P0V9 454 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 ATXN2Q99700 1313 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 GOLGA8RI6L899 631 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 CAPN15O75808 1086 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 LTFP02788 710 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 WDR4P57081 412 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 NKX3-2P78367 333 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 C4orf22Q6V702 233 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 DENND5BQ6ZUT9 1274 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 PSTKQ8IV42 348 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 MAGEB18Q96M61 343 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 DDIT4Q9NX09 232 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
LINC00954-201ENST00000433669 PTCH2Q9Y6C5 1203 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
LINC00954-201ENST00000433669 F8W810 466 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 ADRA1BP35368 520 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 PTK7Q13308 1070 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 DSC3Q14574 896 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RNF180Q86T96 592 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 CTAGE3PQ8IX95 158 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 DCAKDQ8WVC6 231 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 KLF6Q99612 283 aaPredicted RBP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 CEP41Q9BYV8 373 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RCOR3Q9P2K3 495 aaPredicted RBP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 SMG5Q9UPR3 1016 aaKnown RBP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 FAM72CH0Y354 149 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 DGKIO75912 1065 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 TOMM70O94826 608 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 ITGB1P05556 798 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 VAV1P15498 845 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 TSHRP16473 764 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 GRIK3Q13003 919 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 TUSC3Q13454 348 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RASA2Q15283 850 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RAB41Q5JT25 222 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 ANKRD20A2Q5SQ80 823 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 FAM72AQ5TYM5 149 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 ANKRD20A1Q5TYW2 823 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 FAM72DQ6L9T8 149 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
LINC00954-201ENST00000433669 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms