RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ZFXP17010 805 aaPredicted RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 DNAJB2P25686 324 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 ECHS1P30084 290 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 RPL21P46778 160 aaKnown RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 PGFP49763 221 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 NNTQ13423 1086 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 PYROXD2Q8N2H3 581 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 ALLCQ8N6M5 410 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 PLD5Q8N7P1 536 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 CCDC89Q8N998 374 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 RNF34Q969K3 372 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 SERPINB11Q96P15 392 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 RAD9AQ99638 391 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 LBHD1Q9BQE6 289 aaPredicted RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 FUT8Q9BYC5 575 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 TLR8Q9NR97 1041 aaKnown RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 TMPRSS4Q9NRS4 437 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 SNX24Q9Y343 169 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 LINC00271P0C7V0 271 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 ATF2P15336 505 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 GOT1P17174 413 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 EIF3EP60228 445 aaKnown RBP10.97□□□□□ -0.65
NEFM-202ENST00000433454 TAF10Q12962 218 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 CASP8Q14790 479 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 NOMO1Q15155 1222 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 GDAP1L1Q96MZ0 367 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 FAM129AQ9BZQ8 928 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 PRDM16Q9HAZ2 1276 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 OSER1Q9NX31 292 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
NEFM-202ENST00000433454 SLC38A8A6NNN8 435 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 SGK1O00141 431 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 TLL1O43897 1013 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 CCR1P32246 355 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 ZNF135P52742 658 aaPredicted RBP10.96□□□□□ -0.65
NEFM-202ENST00000433454 CALCOCO2Q13137 446 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 EIF4EBP2Q13542 120 aaPredicted RBP10.96□□□□□ -0.65
NEFM-202ENST00000433454 MTMR3Q13615 1198 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 RAB33AQ14088 237 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 BRMS1LQ5PSV4 323 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 MSANTD2Q6P1R3 559 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 C1orf228Q6PIY5 440 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
NEFM-202ENST00000433454 GIPC2Q8TF65 315 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 AUTS2Q8WXX7 1259 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 CASP10Q92851 521 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 SNF8Q96H20 258 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 TMEM121Q9BTD3 319 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 TTLL2Q9BWV7 592 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 MAGEB5Q9BZ81 275 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 ZBP1Q9H171 429 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 GRHL1Q9NZI5 618 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.65
NEFM-202ENST00000433454 SSX2IPQ9Y2D8 614 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 NEU2Q9Y3R4 380 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 HEY1Q9Y5J3 304 aa10.96□□□□□ -0.65
NEFM-202ENST00000433454 EEF2KO00418 725 aaKnown RBP10.96□□□□□ -0.66
NEFM-202ENST00000433454 CREB3O43889 395 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 KRT14P02533 472 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 RBP3P10745 1247 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 TRIP13Q15645 432 aaPredicted RBP10.96□□□□□ -0.66
NEFM-202ENST00000433454 NPNTQ6UXI9 565 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 FMO2Q99518 471 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 NEUROG2Q9H2A3 272 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 ANLNQ9NQW6 1124 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 ARHGEF4Q9NR80 690 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 OLA1Q9NTK5 396 aaKnown RBP10.96□□□□□ -0.66
NEFM-202ENST00000433454 WHRNQ9P202 907 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 FNIP2Q9P278 1114 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 SFMBT1Q9UHJ3 866 aa10.96□□□□□ -0.66
NEFM-202ENST00000433454 MAGED2Q9UNF1 606 aaPredicted RBP10.96□□□□□ -0.66
NEFM-202ENST00000433454 I6L893 689 aaPredicted RBP10.95□□□□□ -0.66
NEFM-202ENST00000433454 MSI1O43347 362 aaKnown RBP10.95□□□□□ -0.66
NEFM-202ENST00000433454 SASH3O75995 380 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 SEC24AO95486 1093 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 CTSAP10619 480 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 KLRC2P26717 231 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 ADCY8P40145 1251 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 ALDH1A3P47895 512 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 NR2C2P49116 596 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 VPS41P49754 854 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 PLTPP55058 493 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 PPP2R5DQ14738 602 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 KLHL23Q8NBE8 558 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 EPAS1Q99814 870 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 PCDH9Q9HC56 1237 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 ZDHHC18Q9NUE0 388 aa10.95□□□□□ -0.66
NEFM-202ENST00000433454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms