RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CPA1P15085 419 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 MAGEA10P43363 369 aaPredicted RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 E2F1Q01094 437 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP54-206ENST00000433394 MTAPQ13126 283 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 PDCLQ13371 301 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TUBA3CQ13748 450 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 R3HDM1Q15032 1099 aaKnown RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 AAK1Q2M2I8 961 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 ERCC6LQ2NKX8 1250 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 FAM90A2PQ658T7 463 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 ATG16L1Q676U5 607 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TUBA3EQ6PEY2 450 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 SYNE3Q6ZMZ3 975 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TSPYL6Q8N831 410 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 PCYOX1LQ8NBM8 494 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 HTRA1Q92743 480 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TWNKQ96RR1 684 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 GPR63Q9BZJ6 419 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 TMX4Q9H1E5 349 aaPredicted RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 CYP4F11Q9HBI6 524 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 GGA3Q9NZ52 723 aa6.68□□□□□ -1.34
USP54-206ENST00000433394 FBXO9Q9UK97 447 aaPredicted RBP6.68□□□□□ -1.34
USP54-206ENST00000433394 NKX2-8O15522 239 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 GUCY1B2O75343 617 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
USP54-206ENST00000433394 EGR2P11161 476 aaPredicted RBP6.67□□□□□ -1.34
USP54-206ENST00000433394 CYP2C18P33260 490 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 PGM1P36871 562 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 SLC25A3Q00325 362 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 HYIQ5T013 277 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 DSTYKQ6XUX3 929 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 DPY19L3Q6ZPD9 716 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 C4orf50Q6ZRC1 276 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 USP51Q70EK9 711 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 ZNF804AQ7Z570 1209 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 CPOQ8IVL8 374 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 ASB10Q8WXI3 467 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 CAVIN3Q969G5 261 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 RBM17Q96I25 401 aaKnown RBP6.67□□□□□ -1.34
USP54-206ENST00000433394 PRR25Q96S07 402 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 USP29Q9HBJ7 922 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 KCNK9Q9NPC2 374 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 TRPC5Q9UL62 973 aaPredicted RBP6.67□□□□□ -1.34
USP54-206ENST00000433394 TBX20Q9UMR3 447 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 GABRQQ9UN88 632 aa6.67□□□□□ -1.34
USP54-206ENST00000433394 ZNF213O14771 459 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 ALDOAP04075 364 aaKnown RBP6.66□□□□□ -1.34
USP54-206ENST00000433394 TMIGD3P0DMS9 266 aaPredicted RBP6.66□□□□□ -1.34
USP54-206ENST00000433394 NR4A1P22736 598 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 MPP1Q00013 466 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 TLE3Q04726 772 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 FHL3Q13643 280 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 PDE1CQ14123 709 aaPredicted RBP6.66□□□□□ -1.34
USP54-206ENST00000433394 TXNRD1Q16881 649 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 FAM153CQ494X1 144 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 ACSM6Q6P461 480 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 ANKRD16Q6P6B7 361 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 Q6ZNX1 250 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 TTLL10Q6ZVT0 673 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 BBS12Q6ZW61 710 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 Q6ZWC4 215 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 RASGRP2Q7LDG7 609 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 HEATR4Q86WZ0 1026 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 SFTPA1Q8IWL2 248 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 ADPRHL1Q8NDY3 354 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 SRFBP1Q8NEF9 429 aaKnown RBP6.66□□□□□ -1.34
USP54-206ENST00000433394 OR52L2PQ8NGH6 319 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 MECRQ9BV79 373 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
USP54-206ENST00000433394 RAB21Q9UL25 225 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 SLC12A4Q9UP95 1085 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 DNAJC16Q9Y2G8 782 aa6.66□□□□□ -1.34
USP54-206ENST00000433394 STX16-NPEPL1H3BU86 382 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 STX16O14662 325 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 SPRY2O43597 315 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 C1SP09871 688 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 EBLN1P0CF75 366 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 ALADP13716 330 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 ENGP17813 658 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 PSMC2P35998 433 aaKnown RBP6.65□□□□□ -1.34
USP54-206ENST00000433394 SEC24CP53992 1094 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 NAP1L1P55209 391 aaKnown RBP6.65□□□□□ -1.34
USP54-206ENST00000433394 MRPS35P82673 323 aaKnown RBP6.65□□□□□ -1.34
USP54-206ENST00000433394 TAP1Q03518 808 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 TBL3Q12788 808 aaKnown RBP6.65□□□□□ -1.34
USP54-206ENST00000433394 DNASE1L3Q13609 305 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 GPR68Q15743 365 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 GPR162Q16538 588 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 L1TD1Q5T7N2 865 aaKnown RBP6.65□□□□□ -1.34
USP54-206ENST00000433394 TMEM88Q6PEY1 159 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 LRRC8DQ7L1W4 858 aa6.65□□□□□ -1.34
USP54-206ENST00000433394 GLMPQ8WWB7 406 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms