RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 NAT8LQ8N9F0 302 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 PGAP3Q96FM1 320 aaPredicted RBP15.7■□□□□ 0.1
SF1-209ENST00000433274 SLC9A7Q96T83 725 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 COLEC11Q9BWP8 271 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 MARCH5Q9NX47 278 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 DTLQ9NZJ0 730 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 FBXW11Q9UKB1 542 aa15.7■□□□□ 0.1
SF1-209ENST00000433274 CFAP69A5D8W1 941 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 EEF2KO00418 725 aaKnown RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 TNFRSF10BO14763 440 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 HOXA2O43364 376 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 BANF1O75531 89 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 ARPP19P56211 112 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 PDIA2Q13087 525 aaKnown RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 HIF1AQ16665 826 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 KCNT2Q6UVM3 1135 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 CDKL3Q8IVW4 592 aaPredicted RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 NETO2Q8NC67 525 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 TMEM109Q9BVC6 243 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 WDCPQ9H6R7 721 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 TTC3P53804 2025 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 PTPRDP23468 1912 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 RGS16O15492 202 aaPredicted RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 TMEM63AO94886 807 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 UPP2O95045 317 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 F9P00740 461 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 CXCL10P02778 98 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 GPR15P49685 360 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 YWHAGP61981 247 aaKnown RBP eCLIP15.69■□□□□ 0.1
SF1-209ENST00000433274 MTM1Q13496 603 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 DDR2Q16832 855 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 SLC45A4Q5BKX6 768 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 C6orf118Q5T5N4 469 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 CENPUQ71F23 418 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 NTAN1Q96AB6 310 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 PGM2Q96G03 612 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 CAPS2Q9BXY5 557 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 PAK5Q9P286 719 aa15.69■□□□□ 0.1
SF1-209ENST00000433274 XPO7Q9UIA9 1087 aaKnown RBP15.69■□□□□ 0.1
SF1-209ENST00000433274 MFSD11O43934 449 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 PGFP49763 221 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 AIF1P55008 147 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 SKOR1P84550 965 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 XRCC4Q13426 336 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 NFE2Q16621 373 aaPredicted RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 ARL13BQ3SXY8 428 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 ZNF280DQ6N043 979 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 RFX8Q6ZV50 586 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 CROCCP2Q86T23 111 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 CCDC110Q8TBZ0 833 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 DQX1Q8TE96 717 aaKnown RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 RNF34Q969K3 372 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 TLCD1Q96CP7 247 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 RTP4Q96DX8 246 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 MRPL9Q9BYD2 267 aaKnown RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 TKTL2Q9H0I9 626 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 RAB6BQ9NRW1 208 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 SF3B1O75533 1304 aaKnown RBP eCLIP15.68■□□□□ 0.18e-7■■■■□ 24.9
SF1-209ENST00000433274 GALTP07902 379 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 ARL4CP56559 192 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 SCAPQ12770 1279 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 FNBP1LQ5T0N5 605 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 FAXCQ5TGI0 409 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 BTBD8Q5XKL5 378 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 CAPN12Q6ZSI9 719 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 CCDC13Q8IYE1 715 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 TTC9BQ8N6N2 239 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 ATAD1Q8NBU5 361 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 QKIQ96PU8 341 aaKnown RBP eCLIP15.68■□□□□ 0.16e-44■■■■□ 25.8
SF1-209ENST00000433274 ROPN1BQ9BZX4 212 aaPredicted RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 ROPN1Q9HAT0 212 aaPredicted RBP15.68■□□□□ 0.1
SF1-209ENST00000433274 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 PCDHB5Q9Y5E4 795 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 NR2E3Q9Y5X4 410 aa15.68■□□□□ 0.1
SF1-209ENST00000433274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.67■□□□□ 0.1
SF1-209ENST00000433274 CXCR3P49682 368 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 TPI1P60174 286 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 GNGT1P63211 74 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 IFI35P80217 286 aaPredicted RBP15.67■□□□□ 0.1
SF1-209ENST00000433274 AUHQ13825 339 aaKnown RBP15.67■□□□□ 0.1
SF1-209ENST00000433274 DPYSQ14117 519 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 MSS51Q4VC12 460 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.67■□□□□ 0.15e-14■■□□□ 13
SF1-209ENST00000433274 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 FUBP3Q96I24 572 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF1-209ENST00000433274 LGMNQ99538 433 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 TRIM62Q9BVG3 475 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 ABCC13Q9NSE7 274 aa15.67■□□□□ 0.1
SF1-209ENST00000433274 SNX10Q9Y5X0 201 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms