RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 F8VZ95 297 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SLC9A3R1O14745 358 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 PAPSS1O43252 624 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 MSI1O43347 362 aaKnown RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TSPAN3O60637 253 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 STC2O76061 302 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 EGFP01133 1207 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 LTFP02788 710 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 KLKB1P03952 638 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 MMEP08473 750 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CHRNB1P11230 501 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 NCAM1P13591 858 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TCF3P15923 654 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 HOXC13P31276 330 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SOX5P35711 763 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 STAT1P42224 750 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TUBP50607 506 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 MLLT6P55198 1093 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SEC13P55735 322 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 BPIFB4P59827 614 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TPM4P67936 248 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 COG7P83436 770 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 AMPD2Q01433 879 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CSTF1Q05048 431 aaKnown RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 GAD2Q05329 585 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 KDSRQ06136 332 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 DHX9Q08211 1270 aaKnown RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 GOLGA8FQ08AF8 430 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 GOLGA8DPQ0D2H9 430 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 USP4Q13107 963 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 NR1I3Q14994 352 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 ANGPT1Q15389 498 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 DHCR24Q15392 516 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 MAP7D1Q3KQU3 841 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 LY6G5CQ5SRR4 150 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SYPL2Q5VXT5 272 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 FSTL4Q6MZW2 842 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 HTR3DQ70Z44 454 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 BHLHA9Q7RTU4 235 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 DDX42Q86XP3 938 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TMEM25Q86YD3 366 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 FMNL3Q8IVF7 1028 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SLC20A1Q8WUM9 679 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CPA5Q8WXQ8 436 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CD101Q93033 1021 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 ATP2A3Q93084 1043 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 BHMTQ93088 406 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 FAM149B1Q96BN6 582 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 MRGPRX2Q96LB1 330 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 HSFY1Q96LI6 401 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 KCTD15Q96SI1 283 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CPXM1Q96SM3 734 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SYNCQ9H7C4 482 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 CNGB3Q9NQW8 809 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 POLR3BQ9NW08 1133 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 PLK2Q9NYY3 685 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 COX16Q9P0S2 106 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 DLGAP2Q9P1A6 1054 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 TBC1D14Q9P2M4 693 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 LSM7Q9UK45 103 aaKnown RBP6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 SIK3Q9Y2K2 1263 aa6.03□□□□□ -1.44
HMGB3P24-201ENST00000433260 C5orf42Q9H799 3197 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 LGALS16A8MUM7 142 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 NEDD8-MDP1E9PL57 170 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 GOLGA8SH3BPF8 625 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TRDMT1O14717 391 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TRIM24O15164 1050 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ATP9BO43861 1147 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 LZTS3O60299 673 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 GREM1O60565 184 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 FBXO21O94952 628 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ERBB2P04626 1255 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CYP17A1P05093 508 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 FYNP06241 537 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ADH5P11766 374 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CHRNB2P17787 502 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TNFAIP3P21580 790 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 CORO1AP31146 461 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 OPRD1P41143 372 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ACADSBP45954 432 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 RPL34P49207 117 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 UBASH3AP57075 661 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 YWHAZP63104 245 aaKnown RBP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 FANCCQ00597 558 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 SLC6A3Q01959 620 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 GRSF1Q12849 480 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TCF15Q12870 199 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 MTAPQ13126 283 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 PDCLQ13371 301 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 C2orf27AQ580R0 203 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 DCAF6Q58WW2 860 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 DGKKQ5KSL6 1271 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 EMC10Q5UCC4 262 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 KLHDC10Q6PID8 442 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 Q6ZS52 159 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 FAM183BPQ6ZVS7 135 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 TMEM110Q86TL2 294 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 C12orf40Q86WS4 652 aa6.02□□□□□ -1.45
HMGB3P24-201ENST00000433260 ERICH1Q86X53 443 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms