RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 EPHB3P54753 998 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 EIF4EBP2Q13542 120 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 SNX30Q5VWJ9 437 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 PTCRAQ6ISU1 281 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 SND1Q7KZF4 910 aaKnown RBP eCLIP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 RTL10Q7L3V2 364 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 FAM131BQ86XD5 332 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 MAP7D3Q8IWC1 876 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF276Q8N554 614 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 FAM71BQ8TC56 605 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 UBXN4Q92575 508 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 ACSF2Q96CM8 615 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 WDR6Q9NNW5 1121 aaKnown RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 MAGED2Q9UNF1 606 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 ASB3Q9Y575 518 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 hCG_1818297A0A087WSY0 165 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF487B1APH4 448 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 IRAK2O43187 625 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 GLUD1P00367 558 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 CXCR3P49682 368 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 CDH6P55285 790 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 KLF1Q13351 362 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-206ENST00000431390 GPM6BQ13491 265 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 CAMK1Q14012 370 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 DPYSL2Q16555 572 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 ITIH5Q86UX2 942 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 CCDC185Q8N715 623 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 NOA1Q8NC60 698 aaKnown RBP18.94■□□□□ 0.62
HMGN1-206ENST00000431390 ADAM32Q8TC27 787 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 MICAL1Q8TDZ2 1067 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 SERPINB11Q96P15 392 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 CDK5RAP1Q96SZ6 601 aaKnown RBP18.94■□□□□ 0.62
HMGN1-206ENST00000431390 AP1M1Q9BXS5 423 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.94■□□□□ 0.62
HMGN1-206ENST00000431390 UXTQ9UBK9 157 aaPredicted RBP18.94■□□□□ 0.62
HMGN1-206ENST00000431390 FZD10Q9ULW2 581 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 AP4E1Q9UPM8 1137 aa18.94■□□□□ 0.62
HMGN1-206ENST00000431390 SYNJ2BP-COX16A0A087WUM0 186 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 TJP3O95049 919 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 RARGP13631 454 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 PPP3CCP48454 512 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 SCAPQ12770 1279 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 KRT81Q14533 505 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 TAF12Q16514 161 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 ARL13BQ3SXY8 428 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 TEX35Q5T0J7 233 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 ANKS1BQ7Z6G8 1248 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 KREMEN2Q8NCW0 462 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 PSMG2Q969U7 264 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 MRPL38Q96DV4 380 aaKnown RBP18.93■□□□□ 0.62
HMGN1-206ENST00000431390 COX16Q9P0S2 106 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 MUC6Q6W4X9 2439 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 UQCRHLA0A096LP55 91 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 PRR33A8MZF0 331 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 H3BQ06 376 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-206ENST00000431390 UQCRHP07919 91 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 CLCN4P51793 760 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 NNTQ13423 1086 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 DPYSL3Q14195 570 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 SIX1Q15475 284 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-206ENST00000431390 ZC3H12AQ5D1E8 599 aaKnown RBP18.93■□□□□ 0.62
HMGN1-206ENST00000431390 BRMS1LQ5PSV4 323 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 CASP10Q92851 521 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 ZNF670Q9BS34 389 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 HERPUD2Q9BSE4 406 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 LMAN2LQ9H0V9 348 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 PCDH18Q9HCL0 1135 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
HMGN1-206ENST00000431390 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 GRXCR2A6NFK2 248 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 C8AP07357 584 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 CD48P09326 243 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 ADRA1BP35368 520 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 IRS1P35568 1242 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 CYP1B1Q16678 543 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 CA9Q16790 459 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 EFHC2Q5JST6 749 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 ADAT2Q7Z6V5 191 aaKnown RBP18.92■□□□□ 0.62
HMGN1-206ENST00000431390 DNAJB7Q7Z6W7 309 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-206ENST00000431390 TADA2BQ86TJ2 420 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 ZDHHC14Q8IZN3 488 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 HEMGNQ9BXL5 484 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 CALN1Q9BXU9 219 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 DHX35Q9H5Z1 703 aaKnown RBP18.92■□□□□ 0.62
HMGN1-206ENST00000431390 WDCPQ9H6R7 721 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 RCOR3Q9P2K3 495 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-206ENST00000431390 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
HMGN1-206ENST00000431390 PHF2O75151 1096 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 LRG1P02750 347 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 SPATA31D3P0C874 917 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 KRT10P13645 584 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 L1CAMP32004 1257 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 PPP2R5DQ14738 602 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 ERCC6LQ2NKX8 1250 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 GLE1Q53GS7 698 aaKnown RBP18.91■□□□□ 0.62
HMGN1-206ENST00000431390 CCDC70Q6NSX1 233 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 SPATA31D4Q6ZUB0 917 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 PRELID2Q8N945 189 aa18.91■□□□□ 0.62
HMGN1-206ENST00000431390 C12orf50Q8NA57 414 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms