RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 DHTKD1Q96HY7 919 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 CEP63Q96MT8 703 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 BCCIPQ9P287 314 aaKnown RBP eCLIP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 AJAP1Q9UKB5 411 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 C4orf47A7E2U8 309 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 RHOBTB1O94844 696 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 FYNP06241 537 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 PRKCHP24723 683 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 IRX4P78413 519 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 TRIP4Q15650 581 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CCDC40Q4G0X9 1142 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 PEAR1Q5VY43 1037 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-202ENST00000430200 RNF43Q68DV7 783 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CACUL1Q86Y37 369 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CHPFQ8IZ52 775 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 OR2I1PQ8NGU4 316 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 SLC35F5Q8WV83 523 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 PIGKQ92643 395 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 MRGPRX1Q96LB2 322 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 FAM124BQ9H5Z6 455 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-202ENST00000430200 POLMQ9NP87 494 aaPredicted RBP12.33□□□□□ -0.44
HDAC4-202ENST00000430200 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 TJP2Q9UDY2 1190 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 ITPR1Q14643 2758 aa12.33□□□□□ -0.44
HDAC4-202ENST00000430200 PCNX2A6NKB5 2137 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 PTPRBP23467 1997 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 M0QYV0 167 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 PMM2O15305 246 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 TSPAN3O60637 253 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 ALDH1A2O94788 518 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 IGLV3-27P01718 113 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 RALAP11233 206 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 VDRP11473 427 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 LCP1P13796 627 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 TBXAS1P24557 533 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 SLC6A4P31645 630 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 ENPP2Q13822 863 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 FUT11Q495W5 492 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 MSANTD2Q6P1R3 559 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 RSRC2Q7L4I2 434 aaKnown RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 ELOA2Q8IYF1 753 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 PGBD3Q8N328 593 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 CPXM2Q8N436 756 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 TTC39CQ8N584 583 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 PRICKLE1Q96MT3 831 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 XPO6Q96QU8 1125 aaKnown RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 MKRN2Q9H000 416 aaKnown RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
HDAC4-202ENST00000430200 PCDHB4Q9Y5E5 795 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 STON1Q9Y6Q2 735 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 DOCK4Q8N1I0 1966 aa12.32□□□□□ -0.44
HDAC4-202ENST00000430200 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 GOLGA6L7A0A1B0GV03 622 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 KCNJ18B7U540 433 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 KCNK5O95279 499 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PAEPP09466 180 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PMLP29590 882 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 HLA-FP30511 346 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 COPAP53621 1224 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PITX1P78337 314 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PAK1Q13153 545 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 ZNF234Q14588 700 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
HDAC4-202ENST00000430200 TRIM61Q5EBN2 209 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 IL31Q6EBC2 164 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PSAPL1Q6NUJ1 521 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 ZNF366Q8N895 744 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
HDAC4-202ENST00000430200 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms