RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 APOL6Q9BWW8 343 aa15.53■□□□□ 0.08
LINC00839-202ENST00000429940 C2orf40Q9H1Z8 148 aa15.53■□□□□ 0.08
LINC00839-202ENST00000429940 RPF1Q9H9Y2 349 aaKnown RBP15.53■□□□□ 0.08
LINC00839-202ENST00000429940 SOX13Q9UN79 622 aa15.53■□□□□ 0.08
LINC00839-202ENST00000429940 FKBP6O75344 327 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 SERPINB9P50453 376 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 RAB27AP51159 221 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 CDC16Q13042 620 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 HIC1Q14526 733 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 EEF1DP3Q658K8 133 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 WDR75Q8IWA0 830 aaKnown RBP15.52■□□□□ 0.08
LINC00839-202ENST00000429940 ADGRF2Q8IZF7 708 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 GSTCDQ8NEC7 633 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 PCDH19Q8TAB3 1148 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 PTPRHQ9HD43 1115 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 SORCS3Q9UPU3 1222 aa15.52■□□□□ 0.08
LINC00839-202ENST00000429940 A0A088AWK7 358 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 ARHGAP42A6NI28 874 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 IL18RAPO95256 599 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 C6orf222P0C671 652 aaPredicted RBP15.52■□□□□ 0.07
LINC00839-202ENST00000429940 VDRP11473 427 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 CPOXP36551 454 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 MAGEA3P43357 314 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 FASTKD1Q53R41 847 aaKnown RBP15.52■□□□□ 0.07
LINC00839-202ENST00000429940 SIGLEC10Q96LC7 697 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 C12orf42Q96LP6 360 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 TUBGCP5Q96RT8 1024 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 SIKE1Q9BRV8 207 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 PCDH18Q9HCL0 1135 aa15.52■□□□□ 0.07
LINC00839-202ENST00000429940 NGRNQ9NPE2 291 aaKnown RBP15.52■□□□□ 0.07
LINC00839-202ENST00000429940 INO80B-WBP1J3KQ70 363 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 ACKR2O00590 384 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 AP1G2O75843 785 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 METTL18O95568 372 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 BIRC2Q13490 618 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 CCDC14Q49A88 953 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 NOL9Q5SY16 702 aaKnown RBP15.51■□□□□ 0.07
LINC00839-202ENST00000429940 TREML2Q5T2D2 321 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 SLC9A4Q6AI14 798 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 MTHFD1LQ6UB35 978 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 CATSPERGQ6ZRH7 1159 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 ZNF534Q76KX8 674 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 INO80BQ9C086 356 aaPredicted RBP15.51■□□□□ 0.07
LINC00839-202ENST00000429940 PCDHA11Q9Y5I1 949 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 LYPLA1O75608 230 aaPredicted RBP15.51■□□□□ 0.07
LINC00839-202ENST00000429940 SLC25A3Q00325 362 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 PDE1BQ01064 536 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 TUBB3Q13509 450 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 BOLA3Q53S33 107 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 EFHC1Q5JVL4 640 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 RAPH1Q70E73 1250 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 CDKL3Q8IVW4 592 aaPredicted RBP15.51■□□□□ 0.07
LINC00839-202ENST00000429940 SHKBP1Q8TBC3 707 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 PIWIL2Q8TC59 973 aaKnown RBP15.51■□□□□ 0.07
LINC00839-202ENST00000429940 SEPT1Q8WYJ6 367 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 PPP2R3CQ969Q6 453 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 FAM167AQ96KS9 214 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 CDT1Q9H211 546 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 S100A14Q9HCY8 104 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 DNAJC16Q9Y2G8 782 aa15.51■□□□□ 0.07
LINC00839-202ENST00000429940 BUD23O43709 281 aaKnown RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 ITM2AO43736 263 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 CA9Q16790 459 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 MBLAC2Q68D91 279 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 JADE1Q6IE81 842 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 C16orf46Q6P387 395 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 AAGABQ6PD74 315 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 C4orf22Q6V702 233 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 TIFABQ6ZNK6 161 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 FAM172AQ8WUF8 416 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 ZNF778Q96MU6 729 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 SNRNP25Q9BV90 132 aaKnown RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 APOBEC2Q9Y235 224 aaKnown RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 SPDYE16A6NNV3 312 aaPredicted RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 LACTBL1A8MY62 500 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 GAS2O43903 313 aaKnown RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 GJB1P08034 283 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 CNTFP26441 200 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 SLC1A6P48664 564 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 RPL10AP62906 217 aaKnown RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 DBN1Q16643 649 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 PPP6R3Q5H9R7 873 aaPredicted RBP15.5■□□□□ 0.07
LINC00839-202ENST00000429940 POU5F2Q8N7G0 328 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 PYDC1Q8WXC3 89 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 MMP19Q99542 508 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 MAF1Q9H063 256 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 FZD8Q9H461 694 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 CYP3A43Q9HB55 503 aa15.5■□□□□ 0.07
LINC00839-202ENST00000429940 LOC285556D6RIA3 1793 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 PAPPA2Q9BXP8 1791 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 C19orf81C9J6K1 198 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 KLHL2O95198 593 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 GSRP00390 522 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 P4HA1P13674 534 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 TPSB2P20231 275 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 CYP3A5P20815 502 aa15.49■□□□□ 0.07
LINC00839-202ENST00000429940 GJA5P36382 358 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms