RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 PDE1BQ01064 536 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 NNTQ13423 1086 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 STILQ15468 1287 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 TUBB8Q3ZCM7 444 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 WSCD1Q658N2 575 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 GIPC2Q8TF65 315 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 HASPINQ8TF76 798 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 ZNF689Q96CS4 500 aaPredicted RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 DNAJC1Q96KC8 554 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 SUSD3Q96L08 255 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 FERD3LQ96RJ6 166 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 TWNKQ96RR1 684 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 TCF12Q99081 682 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 ADAM22Q9P0K1 906 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 HMGXB4Q9UGU5 601 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 STXBP5LQ9Y2K9 1186 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 PRG3Q9Y2Y8 225 aaPredicted RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 REXO2Q9Y3B8 237 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 CDK2AP1O14519 115 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 GABRDO14764 452 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 CYP11A1P05108 521 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 GLI1P08151 1106 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 ZNF16P17020 682 aaPredicted RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 IGFBP6P24592 240 aaPredicted RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 BRCC3P46736 316 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 ALDH7A1P49419 539 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 ANKDD1AQ495B1 522 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 TMEM240Q5SV17 173 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 CD300LGQ6UXG3 332 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 CMTR2Q8IYT2 770 aaKnown RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 CRYBG2Q8N1P7 616 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 SGCDQ92629 289 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 LRRC45Q96CN5 670 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 SPATA16Q9BXB7 569 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 VCXQ9H320 206 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 NKX1-2Q9UD57 310 aaPredicted RBP9.05□□□□□ -0.96
NUP98-207ENST00000429801 ADAM28Q9UKQ2 775 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 PCDHGC3Q9UN70 934 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 ATP8B3O60423 1300 aa9.05□□□□□ -0.96
NUP98-207ENST00000429801 KRT86O43790 486 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CALCAP01258 141 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 ITGB1P05556 798 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 GALTP07902 379 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 TYMPP19971 482 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 S100A1P23297 94 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 S100A5P33763 92 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 MDH1P40925 334 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 SLC11A1P49279 550 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SF3A3Q12874 501 aaKnown RBP eCLIP9.04□□□□□ -0.961e-9■■■■■ 34.6
NUP98-207ENST00000429801 ELAVL2Q12926 359 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 ORC1Q13415 861 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 ACOT1Q86TX2 421 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 HERVK_113Q902F9 699 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CATSPER2Q96P56 530 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SMC6Q96SB8 1091 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 YME1L1Q96TA2 773 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 HEPHQ9BQS7 1158 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 ZNF518BQ9C0D4 1074 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 RC3H2Q9HBD1 1191 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 NENFQ9UMX5 172 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 FADS3Q9Y5Q0 445 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 NR2E3Q9Y5X4 410 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 FNDC1Q4ZHG4 1894 aaPredicted RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 SYN3O14994 580 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 LSM8O95777 96 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 APOEP02649 317 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 H2AFZP0C0S5 128 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 PCNAP12004 261 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 UNGP13051 313 aaPredicted RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 LMO2P25791 158 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 PCSK1P29120 753 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 ADCY8P40145 1251 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 POLD2P49005 469 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 BCAR1P56945 870 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CNGA2Q16280 664 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CLEC16AQ2KHT3 1053 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SPOUT1Q5T280 376 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 H2AFVQ71UI9 128 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 THEM5Q8N1Q8 247 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SCAIQ8N9R8 606 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
NUP98-207ENST00000429801 PHOSPHO2Q8TCD6 241 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 TFAP2BQ92481 460 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 FAM136AQ96C01 138 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 HAUS1Q96CS2 278 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 GBP5Q96PP8 586 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 SLC9A7Q96T83 725 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 PCDHB18PQ96TA0 734 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 ISCUQ9H1K1 167 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 LHX5Q9H2C1 402 aa9.04□□□□□ -0.96
NUP98-207ENST00000429801 CWH43Q9H720 699 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms