RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 LRRC1Q9BTT6 524 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 LRRC3Q9BY71 257 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 DHX35Q9H5Z1 703 aaKnown RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 ETNK2Q9NVF9 386 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 HCFC1R1Q9NWW0 138 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMC6-204ENST00000428868 HSFX1Q9UBD0 423 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 SAE1Q9UBE0 346 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 RASAL2Q9UJF2 1139 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 A0A1W2PPC1 479 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 C2orf78A6NCI8 922 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 ZNF840PA6NDX5 716 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PHF2O75151 1096 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 MAP3K6O95382 1288 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 GLUD1P00367 558 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 HMBSP08397 361 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CSH1P0DML2 217 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CSH2P0DML3 217 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 GOT1P17174 413 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 GJA1P17302 382 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 ELF1P32519 619 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PTPN7P35236 360 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 ALDH1A3P47895 512 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CYP4F8P98187 520 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SLC7A5Q01650 507 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CREMQ03060 361 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 ITIH3Q06033 890 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SEMA3BQ13214 749 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SNX1Q13596 522 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 KRT81Q14533 505 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 DPYSL2Q16555 572 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 BEND5Q7L4P6 421 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 DNAJB7Q7Z6W7 309 aaPredicted RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 RBM23Q86U06 439 aaKnown RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 RFX6Q8HWS3 928 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 KCTD6Q8NC69 237 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 MICAL1Q8TDZ2 1067 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 LRRN4Q8WUT4 740 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PSMG2Q969U7 264 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 NTAN1Q96AB6 310 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SLC39A13Q96H72 371 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 FCRL2Q96LA5 508 aaPredicted RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 MYRFLQ96LU7 910 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 TRIM51Q9BSJ1 452 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CALN1Q9BXU9 219 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 EMILIN2Q9BXX0 1053 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 TKTL2Q9H0I9 626 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 C10orf88Q9H8K7 445 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 MAN1C1Q9NR34 630 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 TLR8Q9NR97 1041 aaKnown RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 COMMD8Q9NX08 183 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 RNF14Q9UBS8 474 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 STK39Q9UEW8 545 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
SMC6-204ENST00000428868 NEU3Q9UQ49 428 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 SSX2IPQ9Y2D8 614 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 COL4A3Q01955 1670 aa9.22□□□□□ -0.93
SMC6-204ENST00000428868 PRRC2BQ5JSZ5 2229 aaKnown RBP9.21□□□□□ -0.93
SMC6-204ENST00000428868 SLC12A8A0AV02 714 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 COCHO43405 550 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 TLR5O60602 858 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 CST8O60676 142 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 LPXNO60711 386 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 ZMYND10O75800 440 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 MOCS2O96007 188 aaPredicted RBP9.21□□□□□ -0.94
SMC6-204ENST00000428868 F11P03951 625 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 AMPD1P23109 780 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 ADRA1BP35368 520 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 CCR2P41597 374 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 PTGIRP43119 386 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 IRAK1P51617 712 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 EPHB3P54753 998 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 COPS2P61201 443 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 SCAPQ12770 1279 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 TRADDQ15628 312 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 CYP1B1Q16678 543 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 BOLA3Q53S33 107 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 C10orf120Q5SQS8 335 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 STXBP5Q5T5C0 1151 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 ZNF697Q5TEC3 545 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 GAREM2Q75VX8 874 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 C14orf80Q86SX3 495 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 PRUNE1Q86TP1 453 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 MIB1Q86YT6 1006 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 TP53INP2Q8IXH6 220 aa9.21□□□□□ -0.94
SMC6-204ENST00000428868 GSPT2Q8IYD1 628 aaKnown RBP9.21□□□□□ -0.94
SMC6-204ENST00000428868 TDHQ8IZJ6 230 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms