RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SH3PXD2AQ5TCZ1 1133 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 BHLHA9Q7RTU4 235 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 FMNL3Q8IVF7 1028 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 SIX6OS1Q8N1H7 587 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 UBR7Q8N806 425 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 EDEM1Q92611 657 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 PLD4Q96BZ4 506 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 TIGD1Q96MW7 591 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 IPO9Q96P70 1041 aaKnown RBP17.88■□□□□ 0.45
TRIM39-209ENST00000428728 FSCN3Q9NQT6 498 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 PILRBQ9UKJ0 227 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 MAN1B1Q9UKM7 699 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 STON1Q9Y6Q2 735 aa17.88■□□□□ 0.45
TRIM39-209ENST00000428728 O00370 1275 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 VDRP11473 427 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 ZNF252P-AS1Q0IIN9 211 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 LMAN2Q12907 356 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 SPDYCQ5MJ68 293 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 PM20D1Q6GTS8 502 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 TMEM270Q6UE05 265 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 ANKS1BQ7Z6G8 1248 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 DDI1Q8WTU0 396 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 RNF139Q8WU17 664 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 MRGPRX1Q96LB2 322 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 HSPA12BQ96MM6 686 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 NT5C1BQ96P26 610 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 GTPBP4Q9BZE4 634 aaKnown RBP17.87■□□□□ 0.45
TRIM39-209ENST00000428728 METTL14Q9HCE5 456 aaKnown RBP17.87■□□□□ 0.45
TRIM39-209ENST00000428728 OLA1Q9NTK5 396 aaKnown RBP17.87■□□□□ 0.45
TRIM39-209ENST00000428728 FBXO10Q9UK96 956 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 CTNND2Q9UQB3 1225 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 SLC27A6Q9Y2P4 619 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 PCDHB4Q9Y5E5 795 aa17.87■□□□□ 0.45
TRIM39-209ENST00000428728 TP53BP1Q12888 1972 aaPredicted RBP17.86■□□□□ 0.45
TRIM39-209ENST00000428728 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 E7ENQ6 273 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 GFRA2O00451 464 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 PIK3R2O00459 728 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 MSI1O43347 362 aaKnown RBP17.86■□□□□ 0.45
TRIM39-209ENST00000428728 ZNF217O75362 1048 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 SETSIPP0DME0 302 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 LCP1P13796 627 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 ENGP17813 658 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 DPP6P42658 865 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 IL12RB1P42701 662 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 RGS7P49802 495 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 ZNF33AQ06730 810 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 STARD3Q14849 445 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 SLC41A1Q8IVJ1 513 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 PPM1KQ8N3J5 372 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 CPXM2Q8N436 756 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 UCMAQ8WVF2 138 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 KAT5Q92993 513 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 DHTKD1Q96HY7 919 aaPredicted RBP17.86■□□□□ 0.45
TRIM39-209ENST00000428728 CEP63Q96MT8 703 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 SFMBT1Q9UHJ3 866 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 CLEC4EQ9ULY5 219 aa17.86■□□□□ 0.45
TRIM39-209ENST00000428728 TSPAN3O60637 253 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 NDUFS2O75306 463 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 CALCAP01258 141 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 BRD2P25440 801 aaKnown RBP17.85■□□□□ 0.45
TRIM39-209ENST00000428728 HOXD12P35452 270 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 ST3GAL2Q16842 350 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 FUT11Q495W5 492 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 PEAR1Q5VY43 1037 aaPredicted RBP17.85■□□□□ 0.45
TRIM39-209ENST00000428728 BSPRYQ5W0U4 402 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 SLC23A3Q6PIS1 610 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 CACUL1Q86Y37 369 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 DEFB124Q8NES8 71 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 NELFBQ8WX92 580 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 TFAP2BQ92481 460 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 GTPBP2Q9BX10 602 aaKnown RBP17.85■□□□□ 0.45
TRIM39-209ENST00000428728 CIPCQ9C0C6 399 aa17.85■□□□□ 0.45
TRIM39-209ENST00000428728 M0QYV0 167 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 BIN1O00499 593 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 KRT37O76014 449 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 PAEPP09466 180 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 HARS2P49590 506 aaKnown RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 ATXN3P54252 364 aaPredicted RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 DAOAP59103 153 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 ZNF234Q14588 700 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 TRIP4Q15650 581 aaPredicted RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 DUOXA1Q1HG43 343 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 TTI2Q6NXR4 508 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 FAM217AQ8IXS0 508 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 TRIML1Q8N9V2 468 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 SORCS1Q8WY21 1168 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 PIWIL1Q96J94 861 aaKnown RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 HBS1LQ9Y450 684 aaKnown RBP17.84■□□□□ 0.45
TRIM39-209ENST00000428728 NUMA1Q14980 2115 aa17.84■□□□□ 0.45
TRIM39-209ENST00000428728 CHD8Q9HCK8 2581 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 PRKCHP24723 683 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 HOXD9P28356 352 aaPredicted RBP17.83■□□□□ 0.44
TRIM39-209ENST00000428728 PPP1R2P41236 205 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 STX17P56962 302 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 SHC2P98077 582 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 ARID5AQ03989 594 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 FOXC1Q12948 553 aa17.83■□□□□ 0.44
TRIM39-209ENST00000428728 EIF4HQ15056 248 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms