RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GZMAP12544 262 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
SGCE-204ENST00000428696 RFC1P35251 1148 aaPredicted RBP15.16■□□□□ 0.02
SGCE-204ENST00000428696 FLT3P36888 993 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 SLC11A2P49281 568 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 UBXN2BQ14CS0 331 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 EML3Q32P44 896 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 LY6G5CQ5SRR4 150 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 UNC45BQ8IWX7 931 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 NAT16Q8N8M0 369 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 TC2NQ8N9U0 490 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 MCEEQ96PE7 176 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 TBCBQ99426 244 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 SPTLC3Q9NUV7 552 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 AGO1Q9UL18 857 aaKnown RBP15.16■□□□□ 0.02
SGCE-204ENST00000428696 NDRG2Q9UN36 371 aaKnown RBP15.16■□□□□ 0.02
SGCE-204ENST00000428696 TLR6Q9Y2C9 796 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 ZNF510Q9Y2H8 683 aa15.16■□□□□ 0.02
SGCE-204ENST00000428696 ANAPC1Q9H1A4 1944 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 TRIOO75962 3097 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 OBSL1O75147 1896 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 KRBA1A5PL33 1030 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 ADH1CP00326 375 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 PDGFBP01127 241 aaPredicted RBP15.15■□□□□ 0.02
SGCE-204ENST00000428696 TCF3P15923 654 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 TFE3P19532 575 aaPredicted RBP15.15■□□□□ 0.02
SGCE-204ENST00000428696 SDC4P31431 198 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 DHCR24Q15392 516 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 ZNF852Q6ZMS4 543 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 TRIM11Q96F44 468 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 WDCPQ9H6R7 721 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 TMEM59LQ9UK28 342 aa15.15■□□□□ 0.02
SGCE-204ENST00000428696 GOLGA6L7A0A1B0GV03 622 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 SIGLEC16A6NMB1 481 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 NEDD8-MDP1E9PL57 170 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 SPECC1L-ADORA2AF8WAN1 911 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 ARNTLO00327 626 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 CDC25BP30305 580 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 SCNN1AP37088 669 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 AMPD2Q01433 879 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 C15orf59Q2T9L4 293 aaPredicted RBP15.14■□□□□ 0.01
SGCE-204ENST00000428696 SLC25A52Q3SY17 297 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 NUGGCQ68CJ6 796 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 SCYL2Q6P3W7 929 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 C3orf20Q8ND61 904 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 DDI1Q8WTU0 396 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 FAM3CQ92520 227 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 VCPIP1Q96JH7 1222 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 DDX23Q9BUQ8 820 aaKnown RBP15.14■□□□□ 0.01
SGCE-204ENST00000428696 BBS2Q9BXC9 721 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 THAP2Q9H0W7 228 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 ISCUQ9H1K1 167 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 C8orf33Q9H7E9 229 aaPredicted RBP15.14■□□□□ 0.01
SGCE-204ENST00000428696 SPHK2Q9NRA0 654 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.14■□□□□ 0.01
SGCE-204ENST00000428696 RRN3Q9NYV6 651 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 PLK2Q9NYY3 685 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 DENND4CQ5VZ89 1909 aa15.14■□□□□ 0.01
SGCE-204ENST00000428696 MUC3AQ02505 3323 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 FAM170BA6NMN3 283 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 MAN2B1O00754 1011 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 IRAK2O43187 625 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 GREM1O60565 184 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 F9P00740 461 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 CYBBP04839 570 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 CYP17A1P05093 508 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 ADH5P11766 374 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 DESP17661 470 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 GPD1P21695 349 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 CCR1P32246 355 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 GJA4P35212 333 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 CHKAP35790 457 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 ATXN1P54253 815 aaKnown RBP15.13■□□□□ 0.01
SGCE-204ENST00000428696 RPL7AP62424 266 aaKnown RBP15.13■□□□□ 0.01
SGCE-204ENST00000428696 MAMLD1Q13495 774 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 ARID5BQ14865 1188 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 PON2Q15165 354 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 SLC18A3Q16572 532 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 TRNP1Q6NT89 227 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 RFWD3Q6PCD5 774 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 ATP6V0D2Q8N8Y2 350 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
SGCE-204ENST00000428696 OTUB2Q96DC9 234 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 FCRL2Q96LA5 508 aaPredicted RBP15.13■□□□□ 0.01
SGCE-204ENST00000428696 PANX2Q96RD6 677 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 NPY6RQ99463 290 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 FOXQ1Q9C009 403 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 SIK2Q9H0K1 926 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 TBC1D17Q9HA65 648 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 TRPV5Q9NQA5 729 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 IMPACTQ9P2X3 320 aa15.13■□□□□ 0.01
SGCE-204ENST00000428696 MRPS17Q9Y2R5 130 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms