RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CLEC17AQ6ZS10 378 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 JAMLQ86YT9 394 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 EPHX4Q8IUS5 362 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 PPP1R10Q96QC0 940 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 FAM118BQ9BPY3 351 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 EPS8L2Q9H6S3 715 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CHORDC1Q9UHD1 332 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MANSC4A6NHS7 340 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 EIF4E1BA6NMX2 242 aaKnown RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CXCL11O14625 94 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 MED24O75448 989 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 DLGAP3O95886 979 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 IGSF6O95976 241 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KRT6AP02538 564 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KRT6BP04259 564 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 OR56A5P0C7T3 313 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KRT6CP48668 564 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CLCN3P51790 818 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 COX10Q12887 443 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 AGBL2Q5U5Z8 902 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 USP50Q70EL3 339 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 LPCAT1Q8NF37 534 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNND1-208ENST00000428599 CAMTA1Q9Y6Y1 1673 aa9.18□□□□□ -0.94
CTNND1-208ENST00000428599 KRT33AO76009 404 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 HOXC6P09630 235 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 RXRGP48443 463 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CTCFP49711 727 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SLC26A2P50443 739 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 THOP1P52888 689 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 FKBP1AP62942 108 aaKnown RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SLC25A24Q6NUK1 477 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 MOXD1Q6UVY6 613 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CYP20A1Q6UW02 462 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KAT2BQ92831 832 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 DTNBP1Q96EV8 351 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 BBS4Q96RK4 519 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 MCCC1Q96RQ3 725 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 LRRC1Q9BTT6 524 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 REXO4Q9GZR2 422 aaKnown RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 VTA1Q9NP79 307 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 NT5MQ9NPB1 228 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 TRIM49D1C9J1S8 452 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 UMPSP11172 480 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SCNN1BP51168 640 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 ATP12AP54707 1039 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 STX4Q12846 297 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GRIK3Q13003 919 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 ACAD10Q6JQN1 1059 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CBWD2Q8IUF1 395 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 COLGALT2Q8IYK4 626 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SYTL5Q8TDW5 730 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 HASPINQ8TF76 798 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KLF6Q99612 283 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 RERGLQ9H628 205 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GGT7Q9UJ14 662 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.17□□□□□ -0.943e-9■□□□□ 10.4
CTNND1-208ENST00000428599 STON1Q9Y6Q2 735 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GUCY1B2O75343 617 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 THRAP10827 490 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CCDC130P13994 396 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 IL2P60568 153 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CSNK2BP67870 215 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GRB10Q13322 594 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 NFIL3Q16649 462 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KYNUQ16719 465 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 FAM120BQ96EK7 910 aaKnown RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 CDCA5Q96FF9 252 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 RIOX1Q9H6W3 641 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 VIPAS39Q9H9C1 493 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SOHLH2Q9NX45 425 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SIK3Q9Y2K2 1263 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 LOC100653049A0A140TA62 436 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 BIRC5O15392 142 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 ATMINO43313 823 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KRT34O76011 436 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 RANBP1P43487 201 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 GJC2Q5T442 439 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 TYW3Q6IPR3 259 aaKnown RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 NT5DC3Q86UY8 548 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SLC22A9Q8IVM8 553 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 C19orf18Q8NEA5 215 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 TMEM237Q96Q45 408 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 PACSIN1Q9BY11 444 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 SPRTNQ9H040 489 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-208ENST00000428599 C10orf88Q9H8K7 445 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KLC4Q9NSK0 619 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 KCNA3P22001 575 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 NUP107P57740 925 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 XRCC4Q13426 336 aa9.17□□□□□ -0.94
CTNND1-208ENST00000428599 MAGEC3Q8TD91 643 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms