RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 USP3Q9Y6I4 520 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 SQORQ9Y6N5 450 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 RASA4BC9J798 803 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 RASA4O43374 803 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 METTL18O95568 372 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 GRK4P32298 578 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 ADRA1BP35368 520 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 ELK3P41970 407 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 YWHAHQ04917 246 aaPredicted RBP10.77□□□□□ -0.68
HDAC9-210ENST00000428307 MPP2Q14168 576 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 KCNJ11Q14654 390 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 EFTUD2Q15029 972 aaKnown RBP eCLIP10.77□□□□□ -0.68
HDAC9-210ENST00000428307 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 BNIPLQ7Z465 357 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 TP53INP2Q8IXH6 220 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 CCNYQ8ND76 341 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 SH3TC2Q8TF17 1288 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 ZNF296Q8WUU4 475 aaPredicted RBP10.77□□□□□ -0.68
HDAC9-210ENST00000428307 SUSD3Q96L08 255 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 CEP41Q9BYV8 373 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 DNAJB4Q9UDY4 337 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 DSEQ9UL01 958 aa10.77□□□□□ -0.68
HDAC9-210ENST00000428307 CFAP69A5D8W1 941 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 ZNF487B1APH4 448 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 MFSD11O43934 449 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 EOMESO95936 686 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 KRT15P19012 456 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 VEGFBP49765 207 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 QPCTQ16769 361 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 HEATR6Q6AI08 1181 aaKnown RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 VSTM1Q6UX27 236 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 CDKL3Q8IVW4 592 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 ATP11CQ8NB49 1132 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 FBF1Q8TES7 1133 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 ATXN2LQ8WWM7 1075 aaKnown RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 MAML1Q92585 1016 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 RTP4Q96DX8 246 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 UROC1Q96N76 676 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 COLEC11Q9BWP8 271 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 KLC2Q9H0B6 622 aa10.77□□□□□ -0.69
HDAC9-210ENST00000428307 WDR6Q9NNW5 1121 aaKnown RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 DMAP1Q9NPF5 467 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-210ENST00000428307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 E7ESA3 106 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 H3BRJ5 948 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 ARVCFO00192 962 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 EEF2KO00418 725 aaKnown RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CHADO15335 359 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 GRIK1P39086 918 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 TSPY1Q01534 308 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 AP1B1Q10567 949 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 RFX8Q6ZV50 586 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 BHLHA9Q7RTU4 235 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CPLX4Q7Z7G2 160 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 TADA2BQ86TJ2 420 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SPATA2LQ8IUW3 424 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 PSTKQ8IV42 348 aaKnown RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 DBF4BQ8NFT6 615 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 TFB1MQ8WVM0 346 aaKnown RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CENPTQ96BT3 561 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 PKMYT1Q99640 499 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 TSEN34Q9BSV6 310 aaKnown RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CFHR5Q9BXR6 569 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 WDCPQ9H6R7 721 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 KIF9Q9HAQ2 790 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 TBC1D13Q9NVG8 400 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 EURLQ9NYK6 297 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 LGALS13Q9UHV8 139 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 RABGEF1Q9UJ41 708 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 ZMYND8Q9ULU4 1186 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SNX10Q9Y5X0 201 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SMAPO00193 183 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CAPN15O75808 1086 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 VAV1P15498 845 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 PHBP35232 272 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 YWHAGP61981 247 aaKnown RBP eCLIP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 XRCC4Q13426 336 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SLC39A12Q504Y0 691 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 LRRC8DQ7L1W4 858 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 CEP57Q86XR8 500 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SCN4BQ8IWT1 228 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 VPS52Q8N1B4 723 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 HTR3CQ8WXA8 447 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 RNF34Q969K3 372 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 SEPT10Q9P0V9 454 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 FBXW11Q9UKB1 542 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
HDAC9-210ENST00000428307 THSD7BQ9C0I4 1608 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 SPAG7O75391 227 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 TADA2AO75478 443 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 GCATO75600 419 aa10.75□□□□□ -0.69
HDAC9-210ENST00000428307 GRIA1P42261 906 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms