RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 GABRG2P18507 467 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 MFAP3P55082 362 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 STILQ15468 1287 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 TRIP4Q15650 581 aaPredicted RBP19.23■□□□□ 0.67
PSPC1-202ENST00000427943 GEN1Q17RS7 908 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 GJB7Q6PEY0 223 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 C11orf74Q86VG3 221 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 SCML4Q8N228 414 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 SPACA7Q96KW9 195 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 UBE2TQ9NPD8 197 aaPredicted RBP19.23■□□□□ 0.67
PSPC1-202ENST00000427943 VPS45Q9NRW7 570 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 ABCC13Q9NSE7 274 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 CACNA2D2Q9NY47 1150 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 FBXO10Q9UK96 956 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 RAD54BQ9Y620 910 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 SPTBN2O15020 2390 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 MUC22E2RYF6 1773 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-202ENST00000427943 ADAMTS9Q9P2N4 1935 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 A0A1W2PQF6 199 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 BCLAF3A2AJT9 711 aaKnown RBP19.22■□□□□ 0.67
PSPC1-202ENST00000427943 TSPAN3O60637 253 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 CYBBP04839 570 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 DHPSP49366 369 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-202ENST00000427943 APBA1Q02410 837 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 KIAA1211LQ6NV74 962 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 TRIM65Q6PJ69 517 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 ARMCX6Q7L4S7 300 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 FAM217AQ8IXS0 508 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 CPXM2Q8N436 756 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 MIS12Q9H081 205 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 CLSTN2Q9H4D0 955 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 MBD1Q9UIS9 605 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-202ENST00000427943 CLEC4EQ9ULY5 219 aa19.22■□□□□ 0.67
PSPC1-202ENST00000427943 HBS1LQ9Y450 684 aaKnown RBP19.22■□□□□ 0.67
PSPC1-202ENST00000427943 PI4KAP42356 2102 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 WASH3PC4AMC7 463 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 CAVIN2O95810 425 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 LTFP02788 710 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 HARS2P49590 506 aaKnown RBP19.21■□□□□ 0.67
PSPC1-202ENST00000427943 MAP7D1Q3KQU3 841 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 SDE2Q6IQ49 451 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 MSANTD2Q6P1R3 559 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 DENND1BQ6P3S1 775 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 CYP2U1Q7Z449 544 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 TMEFF1Q8IYR6 380 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 DDI1Q8WTU0 396 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 IRGQQ8WZA9 623 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 ACP6Q9NPH0 428 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 CALCOCO1Q9P1Z2 691 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 CNTN6Q9UQ52 1028 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 SLC27A6Q9Y2P4 619 aa19.21■□□□□ 0.67
PSPC1-202ENST00000427943 MAP3K13O43283 966 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 LETM1O95202 739 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-202ENST00000427943 NDUFV2P19404 249 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 SLC9A1P19634 815 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 KCNA4P22459 653 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 MTIF2P46199 727 aaKnown RBP19.2■□□□□ 0.66
PSPC1-202ENST00000427943 TPD52L1Q16890 204 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-202ENST00000427943 ARHGAP44Q17R89 818 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 LPCAT2Q7L5N7 544 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 IPO4Q8TEX9 1081 aaKnown RBP19.2■□□□□ 0.66
PSPC1-202ENST00000427943 PIWIL1Q96J94 861 aaKnown RBP19.2■□□□□ 0.66
PSPC1-202ENST00000427943 HSFY1Q96LI6 401 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 GABRG3Q99928 467 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 SLC6A17Q9H1V8 727 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 CD248Q9HCU0 757 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 ST7Q9NRC1 585 aa19.2■□□□□ 0.66
PSPC1-202ENST00000427943 THAP12O43422 761 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 HOXD9P28356 352 aaPredicted RBP19.19■□□□□ 0.66
PSPC1-202ENST00000427943 GPD2P43304 727 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 DPCR1Q3MIW9 517 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 ANKS1BQ7Z6G8 1248 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 GOLGA1Q92805 767 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 EDEM2Q9BV94 578 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 CD93Q9NPY3 652 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 STON1Q9Y6Q2 735 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 NCOR2Q9Y618 2525 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 ATXN2Q99700 1313 aaKnown RBP19.19■□□□□ 0.66
PSPC1-202ENST00000427943 GON4LQ3T8J9 2241 aa19.19■□□□□ 0.66
PSPC1-202ENST00000427943 NYNRINQ9P2P1 1898 aaKnown RBP19.18■□□□□ 0.66
PSPC1-202ENST00000427943 BECN2A8MW95 431 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 PATE3B3GLJ2 98 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 FBXO21O94952 628 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 GNA15P30679 374 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
PSPC1-202ENST00000427943 USP8P40818 1118 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 PTGER3P43115 390 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 SGSHP51688 502 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 MPPE1Q53F39 396 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 STPG1Q5TH74 334 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 IL31Q6EBC2 164 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 GBP6Q6ZN66 633 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 SCUBE3Q8IX30 993 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 SORCS1Q8WY21 1168 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 PIGKQ92643 395 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 FAM149B1Q96BN6 582 aa19.18■□□□□ 0.66
PSPC1-202ENST00000427943 CIPCQ9C0C6 399 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms