RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ADGRD1Q6QNK2 874 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 VPS52Q8N1B4 723 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 ZMIZ2Q8NF64 920 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TFB1MQ8WVM0 346 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CFAP36Q96G28 342 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 SMARCD1Q96GM5 515 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 MAGEB18Q96M61 343 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TGS1Q96RS0 853 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 ADAM2Q99965 735 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 RASSF4Q9H2L5 321 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PIGVQ9NUD9 493 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TMEM30AQ9NV96 361 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 SMG5Q9UPR3 1016 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 INPP5FQ9Y2H2 1132 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TMEM88BA6NKF7 163 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 YJEFN3A6XGL0 299 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 E7ENQ6 273 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CREB3O43889 395 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 MFSD11O43934 449 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 B3GAT3O94766 335 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 USP17L7P0C7H9 530 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CST5P28325 142 aaPredicted RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 MAGEA6P43360 314 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 BRCC3P46736 316 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 IL9RQ01113 521 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PTK7Q13308 1070 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 ITIH4Q14624 930 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 RAB41Q5JT25 222 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 BZW1Q7L1Q6 419 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CAND1Q86VP6 1230 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 METTL23Q86XA0 190 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 AGGF1Q8N302 714 aaeCLIP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PCSK9Q8NBP7 692 aaKnown RBP14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 ADAM32Q8TC27 787 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 DCAKDQ8WVC6 231 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 MYLPFQ96A32 169 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 OLFM3Q96PB7 478 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CYTH2Q99418 400 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 RHOBTB2Q9BYZ6 727 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 THSD7BQ9C0I4 1608 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 CNGB3Q9NQW8 809 aa14.49□□□□□ -0.09
APOBEC3D-202ENST00000427494 TCRBV9S1A1TA0A576 114 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 HACD1B0YJ81 288 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 SPAG6O75602 509 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 DGKIO75912 1065 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 METTL18O95568 372 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 FYNP06241 537 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 VAV1P15498 845 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 GBP2P32456 591 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 WDR4P57081 412 aaKnown RBP14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 GRIK3Q13003 919 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 ZKSCAN8Q15776 578 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 CTU1Q7Z7A3 348 aaKnown RBP14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 HASPINQ8TF76 798 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 HTR3CQ8WXA8 447 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 PPM1EQ8WY54 764 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 RTP3Q9BQQ7 232 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 PRDM16Q9HAZ2 1276 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 NR2E3Q9Y5X4 410 aa14.48□□□□□ -0.09
APOBEC3D-202ENST00000427494 HHLA1C9JL84 531 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 LTFP02788 710 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 NCAM1P13591 858 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 CA4P22748 312 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 CBLBQ13191 982 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 ITGA7Q13683 1181 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 MICALL1Q8N3F8 863 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 MCUQ8NE86 351 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 DENND1AQ8TEH3 1009 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 LGMNQ99538 433 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 RNF186Q9NXI6 227 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 C9IYK1 514 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 SNX3O60493 162 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 ASMTLO95671 621 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 KRT4P19013 534 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 TPSB2P20231 275 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 RPA3P35244 121 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 SLC18A1P54219 525 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 TUSC3Q13454 348 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 SPARCL1Q14515 664 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 TPSAB1Q15661 275 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 TRIM71Q2Q1W2 868 aaKnown RBP14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 KBTBD12Q3ZCT8 623 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 DENND5BQ6ZUT9 1274 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 RFX8Q6ZV50 586 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 NETO2Q8NC67 525 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 HHIPL1Q96JK4 782 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 ZC3H7BQ9UGR2 993 aaKnown RBP14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 IKBKGQ9Y6K9 419 aa14.47□□□□□ -0.09
APOBEC3D-202ENST00000427494 SF3B1O75533 1304 aaKnown RBP eCLIP14.46□□□□□ -0.093e-9■■■■■ 93.6
APOBEC3D-202ENST00000427494 A0A0A0MRY4 1105 aa14.46□□□□□ -0.09
APOBEC3D-202ENST00000427494 TYROBPO43914 113 aa14.46□□□□□ -0.09
APOBEC3D-202ENST00000427494 CPP00450 1065 aa14.46□□□□□ -0.09
APOBEC3D-202ENST00000427494 OAS1P00973 400 aaKnown RBP14.46□□□□□ -0.09
APOBEC3D-202ENST00000427494 CYP11A1P05108 521 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms