RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 CD248Q9HCU0 757 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 ST7Q9NRC1 585 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 NCDNQ9UBB6 729 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 XPO7Q9UIA9 1087 aaKnown RBP13.31□□□□□ -0.28
GPC1-204ENST00000426280 RPP40O75818 363 aaKnown RBP13.3□□□□□ -0.28
GPC1-204ENST00000426280 APBB3O95704 486 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 IGLV3-27P01718 113 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 ZNF18P17022 549 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 BCKDHBP21953 392 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 DRAP1Q14919 205 aaPredicted RBP13.3□□□□□ -0.28
GPC1-204ENST00000426280 KRT31Q15323 416 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 STILQ15468 1287 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 KLHDC7AQ5VTJ3 777 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 KIAA1211LQ6NV74 962 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 TADA2BQ86TJ2 420 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 TMEM110Q86TL2 294 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 LUZP1Q86V48 1076 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 RASSF3Q86WH2 238 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 FAM71AQ8IYT1 594 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 WFDC5Q8TCV5 224 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 DQX1Q8TE96 717 aaKnown RBP13.3□□□□□ -0.28
GPC1-204ENST00000426280 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 RMDN1Q96DB5 314 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 CPXM1Q96SM3 734 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 HINFPQ9BQA5 517 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 SLC6A17Q9H1V8 727 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 SMOC1Q9H4F8 434 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 WDR35Q9P2L0 1181 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 EBF1Q9UH73 591 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 RAD54BQ9Y620 910 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
GPC1-204ENST00000426280 A0A1W2PQF6 199 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 EEF1GP26641 437 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 CNR2P34972 360 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 DGKGP49619 791 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 DGKEP52429 567 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 PDCLQ13371 301 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 LRSAM1Q6UWE0 723 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 CEP68Q76N32 757 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 APTXQ7Z2E3 356 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 ZNF513Q8N8E2 541 aaPredicted RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 TSTD1Q8NFU3 115 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 SORCS1Q8WY21 1168 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 EXOC4Q96A65 974 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 ACDQ96AP0 544 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 PLD4Q96BZ4 506 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 LSM14BQ9BX40 385 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 DCLK3Q9C098 648 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 DUSP15Q9H1R2 295 aaPredicted RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 STOML2Q9UJZ1 356 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 STARD13Q9Y3M8 1113 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 HBS1LQ9Y450 684 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
GPC1-204ENST00000426280 FRYLO94915 3013 aa13.29□□□□□ -0.28
GPC1-204ENST00000426280 CCDC163A0A0D9SF12 145 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 SMTNL1A8MU46 457 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 GRAP2O75791 330 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 ERBB2P04626 1255 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 NCAM1P13591 858 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 GABRG2P18507 467 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 HOXD9P28356 352 aaPredicted RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 COPB1P53618 953 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 PLK5Q496M5 336 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 C2CD6Q53TS8 623 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 TAC4Q86UU9 113 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 OLIG1Q8TAK6 271 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 SLC39A13Q96H72 371 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 GANQ9H2C0 597 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 ARRDC1-AS1Q9H2J1 176 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 OLA1Q9NTK5 396 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 CACNA2D2Q9NY47 1150 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 CALCOCO1Q9P1Z2 691 aa13.28□□□□□ -0.28
GPC1-204ENST00000426280 LIMA1Q9UHB6 759 aaKnown RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 MBD1Q9UIS9 605 aaPredicted RBP13.28□□□□□ -0.28
GPC1-204ENST00000426280 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms