RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 IRF2BP2Q7Z5L9 587 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 SAR1AQ9NR31 198 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 M0QYV0 167 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 HMGCRP04035 888 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 HIC1Q14526 733 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 RASA2Q15283 850 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 OR6B2Q6IFH4 312 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 IFT43Q96FT9 208 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 CISHQ9NSE2 258 aa16.5■□□□□ 0.23
PKP4-205ENST00000426248 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 GRK4P32298 578 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 TSPY1Q01534 308 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 NACA2Q9H009 215 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 NXF3Q9H4D5 531 aaKnown RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 SRRDQ9UH36 339 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 MYADML2A6NDP7 307 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 FCHO1O14526 889 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 ZNF865P0CJ78 1059 aaPredicted RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 VEGFBP49765 207 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 CHN2P52757 468 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 ARPP19P56211 112 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 PSMC1P62191 440 aaKnown RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 ARRDC4Q8NCT1 418 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 PTTG2Q9NZH5 202 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 MAGED2Q9UNF1 606 aaPredicted RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 SPTLC1O15269 473 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 ADORA2BP29275 332 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 PCYT1AP49585 367 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 DCAF4L1Q3SXM0 396 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 ANKMY2Q8IV38 441 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 ZNF564Q8TBZ8 553 aaPredicted RBP16.49■□□□□ 0.23
PKP4-205ENST00000426248 TAS2R14Q9NYV8 317 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
PKP4-205ENST00000426248 PSME4Q14997 1843 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 MED7O43513 233 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 TFPTP0C1Z6 253 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 PHBP35232 272 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 HOXD12P35452 270 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 AQP4P55087 323 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 NFIL3Q16649 462 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 KYAT1Q16773 422 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 SLC13A5Q86YT5 568 aaPredicted RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 ZBED8Q8IZ13 594 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 POU5F2Q8N7G0 328 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 LIN28AQ9H9Z2 209 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 CDHR5Q9HBB8 845 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 PRDM5Q9NQX1 630 aaPredicted RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 C15orf38-AP3S2A0A0A6YYH1 394 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 PMLP29590 882 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 SNX17Q15036 470 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 SLC1A5Q15758 541 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 KLHDC10Q6PID8 442 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 ARPINQ7Z6K5 226 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 NOP9Q86U38 636 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 PRPF39Q86UA1 669 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 EFCAB3Q8N7B9 438 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 CASQ2O14958 399 aaPredicted RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 RGS7P49802 495 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 PDE1BQ01064 536 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 DLG1Q12959 904 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 FAM117BQ6P1L5 589 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 DUS1LQ6P1R4 473 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 RHOT2Q8IXI1 618 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 GSTCDQ8NEC7 633 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 UBA3Q8TBC4 463 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 HASPINQ8TF76 798 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 C10orf82Q8WW14 230 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 MANSC1Q9H8J5 431 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 TTLL3Q9Y4R7 772 aa16.48■□□□□ 0.23
PKP4-205ENST00000426248 MYH9P35579 1960 aaKnown RBP16.48■□□□□ 0.23
PKP4-205ENST00000426248 ADCY6O43306 1168 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 INHAP05111 366 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 ITIH2P19823 946 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 MAGEA4P43358 317 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 RPL5P46777 297 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 IRX4P78413 519 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 USP6NLQ92738 828 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 ART4Q93070 314 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 EIF2AQ9BY44 585 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 PAIP1Q9H074 479 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 EURLQ9NYK6 297 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 RPL26L1Q9UNX3 145 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 MYOCOSA0A1B0GUC4 107 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 DDX3YO15523 660 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 F2P00734 622 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 VCLP18206 1134 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 DRG2P55039 364 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 CDO1Q16878 200 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 ACAD11Q709F0 780 aa16.47■□□□□ 0.23
PKP4-205ENST00000426248 WDR75Q8IWA0 830 aaKnown RBP16.47■□□□□ 0.23
PKP4-205ENST00000426248 GRK7Q8WTQ7 553 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms