RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SFXN1Q9H9B4 322 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRPF39-202ENST00000424478 GOLGA6L7A0A1B0GV03 622 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 IRAK2O43187 625 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 MAP3K6O95382 1288 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 PRAMEF12O95522 483 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 GLI1P08151 1106 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 KCNA5P22460 613 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 PTPN9P43378 593 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 VCPP55072 806 aaKnown RBP13.98□□□□□ -0.17
PRPF39-202ENST00000424478 MRPS31Q92665 395 aaKnown RBP13.98□□□□□ -0.17
PRPF39-202ENST00000424478 CPQQ9Y646 472 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 MYOFQ9NZM1 2061 aa13.98□□□□□ -0.17
PRPF39-202ENST00000424478 DPYSL4O14531 572 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 PRPSAP2O60256 369 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 PYGMP11217 842 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 KRT10P13645 584 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 RDXP35241 583 aaKnown RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 ATP5C1P36542 298 aaKnown RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 ADCY2Q08462 1091 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 RPS6KA1Q15418 735 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 KAZNQ674X7 775 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 MYEOVQ96EZ4 313 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 NAPGQ99747 312 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 ZDHHC7Q9NXF8 308 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 URI1O94763 535 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CENPIQ92674 756 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 WDCPQ9H6R7 721 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 PRDM6Q9NQX0 595 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CLIC5Q9NZA1 410 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 MFHAS1Q9Y4C4 1052 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 ASB3Q9Y575 518 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 LRRD1A4D1F6 860 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 KRT1P04264 644 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 FOSL2P15408 326 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 SCNN1AP37088 669 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 TBX4P57082 545 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 PRSS36Q5K4E3 855 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 B4GALNT4Q76KP1 1039 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 SCML4Q8N228 414 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 NIPA2Q8N8Q9 360 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 HES6Q96HZ4 224 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CALN1Q9BXU9 219 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 UXTQ9UBK9 157 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-202ENST00000424478 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 DOCK8Q8NF50 2099 aa13.97□□□□□ -0.17
PRPF39-202ENST00000424478 CREB3O43889 395 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 KLKB1P03952 638 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 HNRNPA1P09651 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRPF39-202ENST00000424478 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 VIPR2P41587 438 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 PEX5P50542 639 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 IRAK1P51617 712 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 DYNLT1P63172 113 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 DENND1CQ8IV53 801 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 SYCE1Q8N0S2 351 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.17
PRPF39-202ENST00000424478 GCNAQ96QF7 691 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 DNMT3LQ9UJW3 386 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 IGLV3-25P01717 112 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 RFWD3Q6PCD5 774 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-202ENST00000424478 ARHGAP18Q8N392 663 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 ADAMTS19Q8TE59 1207 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 HAUS1Q96CS2 278 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 FCRL2Q96LA5 508 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-202ENST00000424478 SAE1Q9UBE0 346 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-202ENST00000424478 AP4E1Q9UPM8 1137 aa13.96□□□□□ -0.17
PRPF39-202ENST00000424478 CTNNA1P35221 906 aaKnown RBP13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CTC1Q2NKJ3 1217 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 MFSD7Q6UXD7 560 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 RHOT1Q8IXI2 618 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 PDZD8Q8NEN9 1154 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CDCA3Q99618 268 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-202ENST00000424478 HOXA9P31269 272 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CDH6P55285 790 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 STRADAQ7RTN6 431 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 GPR149Q86SP6 731 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 C14orf80Q86SX3 495 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 FGF13Q92913 245 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 LRRC3BQ96PB8 259 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 KCTD15Q96SI1 283 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-202ENST00000424478 OSBPL9Q96SU4 736 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CEP104O60308 925 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 PAGE1O75459 146 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CDC25CP30307 473 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 CXCR3P49682 368 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 PSEN1P49768 467 aa13.95□□□□□ -0.18
PRPF39-202ENST00000424478 TFF2Q03403 129 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms