RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RFXAPO00287 272 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 DUX1O43812 170 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 KIAA0513O60268 411 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ENTPD5O75356 428 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PRNPP04156 253 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 RHOCP08134 193 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NFICP08651 508 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 GLULP15104 373 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PSMA3P25788 255 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ALDH4A1P30038 563 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PRDX5P30044 214 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 KEAP1Q14145 624 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 MAP7Q14244 749 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 STILQ15468 1287 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 POM121L1PQ3SYA9 428 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 TDRD12Q587J7 1177 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 C3orf38Q5JPI3 329 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R26Q5T8A7 1209 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 KCTD18Q6PI47 426 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 TPGS1Q6ZTW0 290 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PHLDB2Q86SQ0 1253 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 VSIG10LQ86VR7 867 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 AHI1Q8N157 1196 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NUP93Q8N1F7 819 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SPEM1Q8N4L4 309 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ATG16L2Q8NAA4 619 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 FAM84BQ96KN1 310 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NECAB3Q96P71 396 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 HHIPQ96QV1 700 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 BAG1Q99933 345 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 UBXN6Q9BZV1 441 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 C1orf115Q9H7X2 142 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 COG4Q9H9E3 785 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 TYW1Q9NV66 732 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 MAFFQ9ULX9 164 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 HPSEQ9Y251 543 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 COL4A5P29400 1685 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 COL11A2P13942 1736 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 BICDL2A1A5D9 508 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NFIBO00712 420 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 UBFD1O14562 309 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 MBTPS2O43462 519 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 TADA3O75528 432 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NDUFB10O96000 172 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 MT-ND5P03915 603 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 INSRRP14616 1297 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ADORA2BP29275 332 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 LEPRP48357 1165 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 RENBPP51606 427 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 HDAC1Q13547 482 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 RCAN2Q14206 197 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 LY6DQ14210 128 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SPA17Q15506 151 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 FLYWCH1Q4VC44 716 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 VSTM1Q6UX27 236 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 DCP2Q8IU60 420 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SRRM1Q8IYB3 904 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PPTC7Q8NI37 304 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 NUDT8Q8WV74 236 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 LZICQ8WZA0 190 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 RERGQ96A58 199 aaPredicted RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PTCHD1Q96NR3 888 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ADAM33Q9BZ11 813 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SGK2Q9HBY8 427 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SMPD4Q9NXE4 827 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 CLIC5Q9NZA1 410 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 ADAMTS1Q9UHI8 967 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 LZTS1Q9Y250 596 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 PCDHGA4Q9Y5G9 962 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 SNCAIPQ9Y6H5 919 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 POLR2AP24928 1970 aaKnown RBP3.68□□□□□ -1.82
TOP2A-201ENST00000423485 BRWD3Q6RI45 1802 aa3.68□□□□□ -1.82
TOP2A-201ENST00000423485 E2F8A0AVK6 867 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 GRM6O15303 877 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 ADH1BP00325 375 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 WDR5P61964 334 aaKnown RBP3.67□□□□□ -1.82
TOP2A-201ENST00000423485 GABREP78334 506 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 FMR1Q06787 632 aaKnown RBP eCLIP3.67□□□□□ -1.825e-7■■■□□ 15.9
TOP2A-201ENST00000423485 ELP6Q0PNE2 266 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 NPY5RQ15761 445 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 KCTD19Q17RG1 926 aaPredicted RBP3.67□□□□□ -1.82
TOP2A-201ENST00000423485 ZRANB3Q5FWF4 1079 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 LDLRAD1Q5T700 205 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 ICE2Q659A1 982 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 OR6B2Q6IFH4 312 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 BZW1Q7L1Q6 419 aaKnown RBP3.67□□□□□ -1.82
TOP2A-201ENST00000423485 GDF7Q7Z4P5 450 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 PDZD3Q86UT5 571 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 EID2Q8N6I1 236 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 REPS2Q8NFH8 660 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 TOR1AIP2Q8NFQ8 470 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R14CQ8TAE6 165 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 NKD1Q969G9 470 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 RMDN1Q96DB5 314 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 TIPINQ9BVW5 301 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 NAA15Q9BXJ9 866 aaKnown RBP3.67□□□□□ -1.82
TOP2A-201ENST00000423485 TTYH3Q9C0H2 523 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 EHD4Q9H223 541 aa3.67□□□□□ -1.82
TOP2A-201ENST00000423485 CENPHQ9H3R5 247 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms