RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PYROXD1Q8WU10 500 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 IRGQQ8WZA9 623 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 CSPG4P5Q96PW8 444 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 SELENOSQ9BQE4 189 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 TRIM62Q9BVG3 475 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 VPS37BQ9H9H4 285 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 USP29Q9HBJ7 922 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 DMAP1Q9NPF5 467 aaPredicted RBP9.36□□□□□ -0.91
SNX20-203ENST00000423026 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 SH3BP1Q9Y3L3 701 aa9.36□□□□□ -0.91
SNX20-203ENST00000423026 E7EVH7 732 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 NRP1O14786 923 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 LTFP02788 710 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 COL6A1P12109 1028 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 NCAM1P13591 858 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 ATP2A2P16615 1042 aaKnown RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 BDNFP23560 247 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 RBL1P28749 1068 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 MMP13P45452 471 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 FAM189BP81408 668 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 YWHAHQ04917 246 aaPredicted RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 BFSP2Q13515 415 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 ARL13BQ3SXY8 428 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 TNFAIP8L3Q5GJ75 292 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 SYPL2Q5VXT5 272 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 CD300LGQ6UXG3 332 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 C4orf50Q6ZRC1 276 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 LRRC8DQ7L1W4 858 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 RTN4RL1Q86UN2 441 aaPredicted RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 CEP57Q86XR8 500 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 TAB3Q8N5C8 712 aaPredicted RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 ZMIZ2Q8NF64 920 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 ARHGEF2Q92974 986 aaKnown RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 RTP4Q96DX8 246 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 SH3GL3Q99963 347 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 RTP3Q9BQQ7 232 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 FRMD8Q9BZ67 464 aaPredicted RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 PPCSQ9HAB8 311 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 MTMR10Q9NXD2 777 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 NAALADL1Q9UQQ1 740 aa9.35□□□□□ -0.91
SNX20-203ENST00000423026 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.35□□□□□ -0.91
SNX20-203ENST00000423026 EXOC1LA0A1B0GW35 172 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 GMNCA6NCL1 334 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 C5orf60A6NFR6 353 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 YJEFN3A6XGL0 299 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 HACD1B0YJ81 288 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 E7ENQ6 273 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 CHADO15335 359 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 MGRN1O60291 552 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 DNAJC8O75937 253 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 SELPP16109 830 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 GOT1P17174 413 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 AMPD1P23109 780 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 SLC45A4Q5BKX6 768 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 ANKRD22Q5VYY1 191 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 BNIPLQ7Z465 357 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 PALM2Q8IXS6 379 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 ABI1Q8IZP0 508 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 RNF139Q8WU17 664 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 CENPTQ96BT3 561 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 RSRC1Q96IZ7 334 aaKnown RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 RAB6BQ9NRW1 208 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 SPATS2LQ9NUQ6 558 aaKnown RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 TSC2P49815 1807 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 FRMPD3Q5JV73 1810 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 HHLA1C9JL84 531 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 ZNF189O75820 626 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 OR1G1P47890 313 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 VEGFBP49765 207 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 RABGGTBP53611 331 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 CACNA2D1P54289 1103 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 GBE1Q04446 702 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 NR1H3Q13133 447 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 BBS9Q3SYG4 887 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 HP1BP3Q5SSJ5 553 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 KCNT2Q6UVM3 1135 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 GPRIN1Q7Z2K8 1008 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 SCML4Q8N228 414 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 PYROXD2Q8N2H3 581 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 ZNF296Q8WUU4 475 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 NTAN1Q96AB6 310 aa9.34□□□□□ -0.91
SNX20-203ENST00000423026 PGAP3Q96FM1 320 aaPredicted RBP9.34□□□□□ -0.91
SNX20-203ENST00000423026 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNX20-203ENST00000423026 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms