RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 ERAP1Q9NZ08 941 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 E2F8A0AVK6 867 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 FAM159BA6NKW6 160 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 ITM2AO43736 263 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 BPGMP07738 259 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 MAGEA3P43357 314 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 SLC34A1Q06495 639 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 EP400NLQ6ZTU2 488 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 SLC25A41Q8N5S1 370 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 PPP1R13LQ8WUF5 828 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 ZNF670Q9BS34 389 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 THTPAQ9BU02 230 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 HESX1Q9UBX0 185 aa16.33■□□□□ 0.2
CDH1-202ENST00000422392 HBS1LQ9Y450 684 aaKnown RBP16.33■□□□□ 0.2
CDH1-202ENST00000422392 ZSWIM8A7E2V4 1837 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 F7P08709 466 aaPredicted RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 LCP1P13796 627 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 KCNA4P22459 653 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 RPL10AP62906 217 aaKnown RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 KCTD2Q14681 263 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 TMEM154Q6P9G4 183 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 CRLF3Q8IUI8 442 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 KBTBD2Q8IY47 623 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 SLC35F5Q8WV83 523 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 TEKT4Q8WW24 435 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 LGMNQ99538 433 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 RBPJLQ9UBG7 517 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 HES2Q9Y543 173 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 CSADQ9Y600 493 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 ADM5C9JUS6 153 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 DPYSL4O14531 572 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 MDM4O15151 490 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 LGALS2P05162 132 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 GOT1P17174 413 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 MAGEA6P43360 314 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 KLC1Q07866 573 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 TMEM62Q0P6H9 643 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 NAIF1Q69YI7 327 aaPredicted RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 ZNF778Q96MU6 729 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 KCTD15Q96SI1 283 aaPredicted RBP16.32■□□□□ 0.2
CDH1-202ENST00000422392 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 WWP1Q9H0M0 922 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 TMPRSS4Q9NRS4 437 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 AP4E1Q9UPM8 1137 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
CDH1-202ENST00000422392 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 A6NJR5 290 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 ENO4A6NNW6 628 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 TSPAN1O60635 241 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 CCDC130P13994 396 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 VAV1P15498 845 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 ADORA2BP29275 332 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 CRHR1P34998 444 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 STX3Q13277 289 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 FAM187BQ17R55 369 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 HEATR6Q6AI08 1181 aaKnown RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 ATG14Q6ZNE5 492 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 TMPRSS6Q8IU80 811 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 CDKL3Q8IVW4 592 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 MCUQ8NE86 351 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 FAM136AQ96C01 138 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 PANX3Q96QZ0 392 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 NFKBIZQ9BYH8 718 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 FRMD8Q9BZ67 464 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 DTLQ9NZJ0 730 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 PSAT1Q9Y617 370 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 GSRP00390 522 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 SLC26A2P50443 739 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 MXRA7P84157 204 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 FASTKD1Q53R41 847 aaKnown RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 PPP1R14CQ8TAE6 165 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 C18orf25Q96B23 403 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 CSPG4P5Q96PW8 444 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 TBCBQ99426 244 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 CCDC106Q9BWC9 280 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 MMADHCQ9H3L0 296 aaPredicted RBP16.31■□□□□ 0.2
CDH1-202ENST00000422392 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
CDH1-202ENST00000422392 GCATO75600 419 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 ALDOAP04075 364 aaKnown RBP16.3■□□□□ 0.2
CDH1-202ENST00000422392 OLIG2Q13516 323 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 CES3Q6UWW8 571 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 SCUBE1Q8IWY4 988 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 TRIM42Q8IWZ5 723 aa16.3■□□□□ 0.2
CDH1-202ENST00000422392 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms